RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 GSC2O15499 205 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 ENTPD1P49961 510 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 CBX1P83916 185 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 TSTQ16762 297 aaKnown RBP13.14□□□□□ -0.31
UBXN1-217ENST00000534176 MEP1BQ16820 701 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 PCK2Q16822 640 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 ZNF362Q5T0B9 420 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-217ENST00000534176 DRAM2Q6UX65 266 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 GLCCI1Q86VQ1 547 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 OR8G5Q8NG78 346 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 OR8D4Q8NGM9 314 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 OR51F2Q8NH61 342 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 YIPF5Q969M3 257 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 NMNAT2Q9BZQ4 307 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 TOR3AQ9H497 397 aa13.14□□□□□ -0.31
UBXN1-217ENST00000534176 PDP1Q9P0J1 537 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-217ENST00000534176 SONP18583 2426 aaKnown RBP13.14□□□□□ -0.31
UBXN1-217ENST00000534176 JMJD1CQ15652 2540 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 ZSCAN5BA6NJL1 495 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 LYNX1G3V0Z9 82 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 M0R135 149 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 FKBP6O75344 327 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 SOX14O95416 240 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 LYNX1P0DP58 116 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 OSMP13725 252 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 SPI1P17947 270 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 SRD5A1P18405 259 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 GRB2P62993 217 aaKnown RBP13.13□□□□□ -0.31
UBXN1-217ENST00000534176 CRMP1Q14194 572 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 CORO6Q6QEF8 472 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 SHFQ7M4L6 423 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.13□□□□□ -0.31
UBXN1-217ENST00000534176 CYB561A3Q8NBI2 242 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 CLDND2Q8NHS1 167 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 CCL17Q92583 94 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 ZNF799Q96GE5 643 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 NIPSNAP1Q9BPW8 284 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 ARMC1Q9NVT9 282 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 MRPL22Q9NWU5 206 aaKnown RBP13.13□□□□□ -0.31
UBXN1-217ENST00000534176 VNN3Q9NY84 501 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
UBXN1-217ENST00000534176 TRAV20A0A0B4J274 112 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 IQCF6A8MYZ5 107 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 ZNF878C9JN71 531 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 F5H5K5 113 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 PRODHO43272 600 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 CDC14BO60729 498 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 MSMBP08118 114 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 ACSM4P0C7M7 580 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 FCGR1AP12314 374 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 GATA3P23771 443 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 OTX1P32242 354 aaPredicted RBP13.12□□□□□ -0.31
UBXN1-217ENST00000534176 SRP9P49458 86 aaKnown RBP13.12□□□□□ -0.31
UBXN1-217ENST00000534176 PPP1R8Q12972 351 aaKnown RBP13.12□□□□□ -0.31
UBXN1-217ENST00000534176 TRIP10Q15642 601 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 SNCBQ16143 134 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 FAM120AOSQ5T036 256 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 ACSM5Q6NUN0 579 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 SHQ1Q6PI26 577 aaKnown RBP13.12□□□□□ -0.31
UBXN1-217ENST00000534176 CFAP77Q6ZQR2 320 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 LINC00346Q8IVM7 164 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 CELF2-AS1Q8N7Q2 184 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 ATG16L2Q8NAA4 619 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 OR2Z1Q8NG97 314 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 PLEKHA8Q96JA3 519 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 FN3KQ9H479 309 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 MSL2Q9HCI7 577 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 KIF17Q9P2E2 1029 aa13.12□□□□□ -0.31
UBXN1-217ENST00000534176 TMEFF2Q9UIK5 374 aaPredicted RBP13.12□□□□□ -0.31
UBXN1-217ENST00000534176 LRRC30A6NM36 301 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 PRR23D1E9PI22 279 aaPredicted RBP13.11□□□□□ -0.31
UBXN1-217ENST00000534176 FSTL3O95633 263 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 GPANK1O95872 356 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 LCATP04180 440 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 DBHP09172 617 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 PRR23D2P0DMB1 279 aaPredicted RBP13.11□□□□□ -0.31
UBXN1-217ENST00000534176 CFL1P23528 166 aaKnown RBP13.11□□□□□ -0.31
UBXN1-217ENST00000534176 IGFBP5P24593 272 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 RAD23AP54725 363 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 MZT1Q08AG7 82 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 TAF13Q15543 124 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 SLC35D3Q5M8T2 416 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 PGAP1Q75T13 922 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 DCXRQ7Z4W1 244 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 KLBQ86Z14 1044 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 C1orf87Q8N0U7 546 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 MUC20Q8N307 709 aaPredicted RBP13.11□□□□□ -0.31
UBXN1-217ENST00000534176 PARP8Q8N3A8 854 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 SPICQ8N5J4 248 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 ZNF454Q8N9F8 522 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 OR6K6Q8NGW6 343 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 OR4Q3Q8NH05 313 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 SLC7A6Q92536 515 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 TMEM186Q96B77 213 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 KCNJ15Q99712 375 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 COPS4Q9BT78 406 aa13.11□□□□□ -0.31
UBXN1-217ENST00000534176 CADM1Q9BY67 442 aaKnown RBP13.11□□□□□ -0.31
UBXN1-217ENST00000534176 ZNF665Q9H7R5 613 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms