RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 MGLLQ99685 303 aa16.54■□□□□ 0.24
SMPD1-205ENST00000531303 OR10A4Q9H209 315 aa16.54■□□□□ 0.24
SMPD1-205ENST00000531303 TRIM36Q9NQ86 728 aa16.54■□□□□ 0.24
SMPD1-205ENST00000531303 NPDC1Q9NQX5 325 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-205ENST00000531303 NPAP1Q9NZP6 1156 aa16.54■□□□□ 0.24
SMPD1-205ENST00000531303 SIRT4Q9Y6E7 314 aaPredicted RBP16.54■□□□□ 0.24
SMPD1-205ENST00000531303 LOC110117498-PIK3R3F6TDL0 507 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 J3QKU1 62 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 IGKV3-15P01624 115 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 CECR9P0C854 216 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 COX5BP10606 129 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 PPP3CBP16298 524 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 TPTEP56180 551 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 HGFACQ04756 655 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 ODF4Q2M2E3 257 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 ZNF829Q3KNS6 432 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-205ENST00000531303 ARMCX4Q5H9R4 360 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 FAM57BQ71RH2 274 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 PAQR4Q8N4S7 273 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-205ENST00000531303 MUL1Q969V5 352 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 RNF166Q96A37 237 aaPredicted RBP16.53■□□□□ 0.24
SMPD1-205ENST00000531303 POM121L2Q96KW2 1035 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 COG8Q96MW5 612 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 NDRG3Q9UGV2 375 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 R4GMQ9 66 aa16.53■□□□□ 0.24
SMPD1-205ENST00000531303 USP9XQ93008 2570 aaPredicted RBP16.52■□□□□ 0.24
SMPD1-205ENST00000531303 CADP27708 2225 aa16.52■□□□□ 0.24
SMPD1-205ENST00000531303 IGHV1-18A0A0C4DH31 117 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 ACSM4P0C7M7 580 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 NANOS3P60323 173 aaKnown RBP16.52■□□□□ 0.23
SMPD1-205ENST00000531303 SRSF1Q07955 248 aaKnown RBP eCLIP16.52■□□□□ 0.23
SMPD1-205ENST00000531303 TSTQ16762 297 aaKnown RBP16.52■□□□□ 0.23
SMPD1-205ENST00000531303 TBC1D28Q2M2D7 210 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 ARL9Q6T311 187 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 OPALINQ96PE5 141 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 DOK1Q99704 481 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 OR51B6Q9H340 312 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 NIPAL2Q9H841 368 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 CDH20Q9HBT6 801 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 CRNNQ9UBG3 495 aaPredicted RBP16.52■□□□□ 0.23
SMPD1-205ENST00000531303 SLC22A13Q9Y226 551 aa16.52■□□□□ 0.23
SMPD1-205ENST00000531303 TRBV2A0A0J9YWF9 115 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 TUBAL3A6NHL2 446 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 SRSF10O75494 262 aaKnown RBP16.51■□□□□ 0.23
SMPD1-205ENST00000531303 IGLV1-44P01699 117 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 LCATP04180 440 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 TFAP2AP05549 437 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 JUNBP17275 347 aaPredicted RBP16.51■□□□□ 0.23
SMPD1-205ENST00000531303 CELP19835 753 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 ANOS1P23352 680 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 NR1H2P55055 460 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 GP2P55259 537 aaKnown RBP16.51■□□□□ 0.23
SMPD1-205ENST00000531303 PSMA6P60900 246 aaKnown RBP16.51■□□□□ 0.23
SMPD1-205ENST00000531303 SORDQ00796 357 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 SLC3A1Q07837 685 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 KRTAP27-1Q3LI81 207 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 PRSS35Q8N3Z0 413 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 OR2G2Q8NGZ5 317 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 TMIGD2Q96BF3 282 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 PGAM5Q96HS1 289 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 FAM206AQ9NX38 181 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 ST6GALNAC2Q9UJ37 374 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 OR52A1Q9UKL2 312 aa16.51■□□□□ 0.23
SMPD1-205ENST00000531303 C5orf63A6NC05 138 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 H3BSH0 61 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 TBX1O43435 398 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 OTX1P32242 354 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-205ENST00000531303 DCTDP32321 178 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 KIR3DL2P43630 455 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 MLLT11Q13015 90 aaPredicted RBP16.5■□□□□ 0.23
SMPD1-205ENST00000531303 ALKBH1Q13686 389 aaKnown RBP16.5■□□□□ 0.23
SMPD1-205ENST00000531303 WDR38Q5JTN6 314 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 BCL2L15Q5TBC7 163 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 LIPKQ5VXJ0 399 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 RPL22L1Q6P5R6 122 aaKnown RBP16.5■□□□□ 0.23
SMPD1-205ENST00000531303 DRAM2Q6UX65 266 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 SEZ6L2Q6UXD5 910 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 FAM169BQ8N8A8 192 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 OR1J2Q8NGS2 313 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 FRRS1LQ9P0K9 344 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 ATPIF1Q9UII2 106 aa16.5■□□□□ 0.23
SMPD1-205ENST00000531303 C19orf84I3L1E1 186 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 APOC1P02654 83 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 TGM4P49221 684 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 MMP16P51512 607 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 TAS2R43P59537 309 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 MRPL28Q13084 256 aaKnown RBP16.49■□□□□ 0.23
SMPD1-205ENST00000531303 CDK5R1Q15078 307 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 GFOD2Q3B7J2 385 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 SYT6Q5T7P8 510 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-205ENST00000531303 CATSPERDQ86XM0 798 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 EGFL6Q8IUX8 553 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 UFD1Q92890 307 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 C4orf45Q96LM5 186 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 PBOV1Q9GZY1 135 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 MOV10Q9HCE1 1003 aaKnown RBP16.49■□□□□ 0.23
SMPD1-205ENST00000531303 G6PC2Q9NQR9 355 aa16.49■□□□□ 0.23
SMPD1-205ENST00000531303 UBR5O95071 2799 aaPredicted RBP16.49■□□□□ 0.23
SMPD1-205ENST00000531303 WIPF3A6NGB9 483 aa16.48■□□□□ 0.23
SMPD1-205ENST00000531303 OGG1O15527 345 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms