RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 TRAPPC2BP0DI82 140 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 SRFP11831 508 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 RGS19P49795 217 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 TEX261Q6UWH6 196 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 MOB3CQ70IA8 216 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 CPEB2Q7Z5Q1 589 aaKnown RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 MUC20Q8N307 709 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 PTPMT1Q8WUK0 201 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 TMED6Q8WW62 240 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 SLAMF9Q96A28 289 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 ELF5Q9UKW6 265 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 U3KQ87 197 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 MED19A0JLT2 244 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 FAM166BA8MTA8 275 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 RAB6AP20340 208 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 FOLR3P41439 243 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 CX3CR1P49238 355 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 PER3P56645 1201 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 RPS15P62841 145 aaKnown RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 MFGE8Q08431 387 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 MYBPHQ13203 477 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 RIN1Q13671 783 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 RBPMSQ93062 196 aaKnown RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 OR8B4Q96RC9 309 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 ATPIF1Q9UII2 106 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 hCG_1807616A0A1W2PRN6 198 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 BLACEA4D250 179 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 ARPC3O15145 178 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 DUSP1P28562 367 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 MAP2K6P52564 334 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 CCL7P80098 99 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 KRBOX4Q5JUW0 171 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 TMEM88Q6PEY1 159 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 ZSCAN1Q8NBB4 408 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 SCGB3A2Q96PL1 93 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 NAA11Q9BSU3 229 aaPredicted RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 PAPOLGQ9BWT3 736 aaKnown RBP11.11□□□□□ -0.63
SCN3B-206ENST00000530277 CHST11Q9NPF2 352 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 FOXJ3Q9UPW0 622 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 PIGLQ9Y2B2 252 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 R4GN57 208 aa11.11□□□□□ -0.63
SCN3B-206ENST00000530277 A0A0B4J293 547 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 S100GP29377 79 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ZBTB37Q5TC79 503 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 PLCXD3Q63HM9 321 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 SLC16A14Q7RTX9 510 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 SULF2Q8IWU5 870 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 TCTE3Q8IZS6 198 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 SLC22A24Q8N4F4 322 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 AGBL5Q8NDL9 886 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR52N4Q8NGI2 321 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 EDAQ92838 391 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 NECAB3Q96P71 396 aaPredicted RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 DHRS9Q9BPW9 319 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 CFHR5Q9BXR6 569 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 TCRBV16S1A1N1A0A5B0 115 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ADAM10O14672 748 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR4E1P0C645 316 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 RRASP10301 218 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 NR2C1P13056 603 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 POU3F2P20265 443 aaPredicted RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 CCR5P51681 352 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 SLC37A1P57057 533 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 RPS18P62269 152 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 UBE2IP63279 158 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 PLP2Q04941 152 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 CDONQ4KMG0 1287 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 AAED1Q7RTV5 226 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 RPS19BP1Q86WX3 136 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ESX1Q8N693 406 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR1N1Q8NGS0 311 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR2AE1Q8NHA4 323 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ROBO4Q8WZ75 1007 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 SPTSSAQ969W0 71 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 LIN37Q96GY3 246 aaPredicted RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 PPA2Q9H2U2 334 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 DLL4Q9NR61 685 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 SDHAF2Q9NX18 166 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ZNF223Q9UK11 482 aaPredicted RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 NXT1Q9UKK6 140 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 DICER1Q9UPY3 1922 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 TRAV1-2A0A0B4J238 106 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 TGFBR3LH3BV60 316 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 EIF4E2O60573 245 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 LMX1BO60663 402 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR8U9P0C7N5 309 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 IL9P15248 144 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 GLB1P16278 677 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 MSX1P28360 303 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 FASLGP48023 281 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 FGL1Q08830 312 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ABHD17BQ5VST6 288 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR5T1Q8NG75 326 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 CMSS1Q9BQ75 279 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 MS4A7Q9GZW8 240 aaPredicted RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 ABI3Q9P2A4 366 aa11.1□□□□□ -0.63
SCN3B-206ENST00000530277 MTCL1Q9Y4B5 1905 aaKnown RBP11.1□□□□□ -0.63
SCN3B-206ENST00000530277 OR5H14A6NHG9 310 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms