RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 H3BSH0 61 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 OCM2P0CE71 109 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 B4GALT1P15291 398 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 CTSSP25774 331 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 SOX2P48431 317 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 C4orf17Q53FE4 359 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 VWA1Q6PCB0 445 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 SLC22A24Q8N4F4 322 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 CNEP1R1Q8N9A8 125 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 GPR148Q8TDV2 347 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 DERL3Q96Q80 235 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 SFXN3Q9BWM7 321 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 SMURF1Q9HCE7 757 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 BRD7Q9NPI1 651 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 G6PC2Q9NQR9 355 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 FAM206AQ9NX38 181 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-216ENST00000530004 UPB1Q9UBR1 384 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 ESPL1Q14674 2120 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 TRAV1-2A0A0B4J238 106 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 IQCMA0A1B0GVH7 501 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF587BE7ETH6 402 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 PIN1P1O15428 100 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 CST2P09228 141 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 S100A5P33763 92 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 MMP16P51512 607 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 PSMA6P60900 246 aaKnown RBP12.61□□□□□ -0.39
TTC39A-216ENST00000530004 HIST1H3AP68431 136 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 BCL2L15Q5TBC7 163 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 HIST2H3PS2Q5TEC6 136 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 HIST2H3AQ71DI3 136 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 TPRA1Q86W33 373 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 OR51A4Q8NGJ6 313 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 OR6K3Q8NGY3 331 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 CCDC120Q96HB5 630 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 C12orf49Q9H741 205 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 NIPAL2Q9H841 368 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 AKIP1Q9NQ31 210 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF629Q9UEG4 869 aaPredicted RBP12.61□□□□□ -0.39
TTC39A-216ENST00000530004 SLC5A6Q9Y289 635 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 PEX16Q9Y5Y5 336 aa12.61□□□□□ -0.39
TTC39A-216ENST00000530004 PHF3Q92576 2039 aaKnown RBP12.6□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF462Q96JM2 2506 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 CLDN25C9JDP6 229 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 RPL36A-HNRNPH2H7BZ11 118 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 DOK2O60496 412 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 IL18BPO95998 194 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 MAPK3P27361 379 aaPredicted RBP12.6□□□□□ -0.39
TTC39A-216ENST00000530004 PRKXP51817 358 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 GRB2P62993 217 aaKnown RBP12.6□□□□□ -0.39
TTC39A-216ENST00000530004 ADORA2A-AS1P86434 159 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 CCDC92Q53HC0 331 aaPredicted RBP12.6□□□□□ -0.39
TTC39A-216ENST00000530004 ELFN2Q5R3F8 820 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF813Q6ZN06 617 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 NR2C2APQ86WQ0 139 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 UBE2J2Q8N2K1 259 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 TSEN15Q8WW01 171 aaKnown RBP12.6□□□□□ -0.39
TTC39A-216ENST00000530004 S100ZQ8WXG8 99 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 AP3S1Q92572 193 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 ORAI1Q96D31 301 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 STARD4Q96DR4 205 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 ATF6BQ99941 703 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 HMG20AQ9NP66 347 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 PLEK2Q9NYT0 353 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 CACNA1CQ13936 2221 aa12.6□□□□□ -0.39
TTC39A-216ENST00000530004 MED12LQ86YW9 2145 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 DOCK7Q96N67 2140 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 RELNP78509 3460 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 CTDSP2O14595 271 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 BMP4P12644 408 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 SRMP19623 302 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 RAB3BP20337 219 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 OPRM1P35372 400 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 CX3CR1P49238 355 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 OR10A3P58181 314 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 FAPQ12884 760 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 DYNC1I2Q13409 638 aaKnown RBP12.59□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF846Q147U1 533 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 STK11Q15831 433 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 C9orf135Q5VTT2 229 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 MTFR2Q6P444 385 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF704Q6ZNC4 412 aaPredicted RBP12.59□□□□□ -0.39
TTC39A-216ENST00000530004 SLC16A14Q7RTX9 510 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 BTLAQ7Z6A9 289 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 KCNJ15Q99712 375 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 PBOV1Q9GZY1 135 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 PLSCR4Q9NRQ2 329 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 PRSS50Q9UI38 385 aa12.59□□□□□ -0.39
TTC39A-216ENST00000530004 TRBV5-7A0A0A0MS05 114 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 PYCARD-AS1I3L0S3 204 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 RGS5O15539 181 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 FARS2O95363 451 aaKnown RBP12.58□□□□□ -0.39
TTC39A-216ENST00000530004 CGAP01215 116 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 ISG15P05161 165 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 UBCP0CG48 685 aaKnown RBP12.58□□□□□ -0.39
TTC39A-216ENST00000530004 BMP5P22003 454 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 OR3A2P47893 321 aa12.58□□□□□ -0.39
TTC39A-216ENST00000530004 FOXG1P55316 489 aaPredicted RBP12.58□□□□□ -0.39
TTC39A-216ENST00000530004 ZNF121P58317 390 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms