RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GLCCI1Q86VQ1 547 aa28■■■□□ 2.07
SSSCA1-205ENST00000527920 CCL17Q92583 94 aa28■■■□□ 2.07
SSSCA1-205ENST00000527920 FEVQ99581 238 aa28■■■□□ 2.07
SSSCA1-205ENST00000527920 NIPSNAP1Q9BPW8 284 aa28■■■□□ 2.07
SSSCA1-205ENST00000527920 TMEFF2Q9UIK5 374 aaPredicted RBP28■■■□□ 2.07
SSSCA1-205ENST00000527920 IFNGP01579 166 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 MSMBP08118 114 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 ACSM4P0C7M7 580 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 MVKQ03426 396 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 AVPI1Q5T686 147 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 RAB39BQ96DA2 213 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 YY1AP1Q9H869 796 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 IL19Q9UHD0 177 aa27.99■■■□□ 2.07
SSSCA1-205ENST00000527920 FAM157AC9JC47 383 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 SURF4O15260 269 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 DNAJC8O75937 253 aaPredicted RBP27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 ANPEPP15144 967 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 TNFRSF1AP19438 455 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 OR2Z1Q8NG97 314 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 OR51F2Q8NH61 342 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 TEX47Q8TBZ9 253 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 MAP6Q96JE9 813 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 ZNF665Q9H7R5 613 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 CMC2Q9NRP2 79 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 DDX28Q9NUL7 540 aaKnown RBP27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 PTTG3PQ9NZH4 202 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 COMMD3-BMI1R4GMX3 469 aa27.98■■■□□ 2.07
SSSCA1-205ENST00000527920 FBN1P35555 2871 aaKnown RBP27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 RIIAD1A6NNX1 92 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 ERFP50548 548 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 BLVRAP53004 296 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 HLXQ14774 488 aaPredicted RBP27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 PCK2Q16822 640 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 OR8G5Q8NG78 346 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 ZNRF4Q8WWF5 429 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 TMEM186Q96B77 213 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 MXRA5Q9NR99 2828 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 DNHD1Q96M86 4753 aa27.97■■■□□ 2.07
SSSCA1-205ENST00000527920 TCRBV3S1A0A5B6 114 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 GNGT2O14610 69 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 ZNF3P17036 446 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 SPI1P17947 270 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 FMO3P31513 532 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 TEX30Q5JUR7 227 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 SLC27A4Q6P1M0 643 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 IL17RELQ6ZVW7 336 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 PEG10Q86TG7 708 aaKnown RBP27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 OR9Q1Q8NGQ5 310 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 POMPQ9Y244 141 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 CUBNO60494 3623 aa27.96■■■□□ 2.07
SSSCA1-205ENST00000527920 IQCF6A8MYZ5 107 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 F5H5K5 113 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 DEAF1O75398 565 aaPredicted RBP27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 SELEP16581 610 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 GRK5P34947 590 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 TPTEP56180 551 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 SPRNQ5BIV9 151 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 ACSM5Q6NUN0 579 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 CXXC5Q7LFL8 322 aaKnown RBP27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 SPATA24Q86W54 205 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 PAPD5Q8NDF8 572 aaKnown RBP27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 OR10S1Q8NGN2 331 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 OR13G1Q8NGZ3 307 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 SPTSSAQ969W0 71 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 ZNF582Q96NG8 517 aaPredicted RBP27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 HCAR1Q9BXC0 346 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 HIF1ANQ9NWT6 349 aa27.95■■■□□ 2.06
SSSCA1-205ENST00000527920 TRAV20A0A0B4J274 112 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 A0A1B0GWJ7 208 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 TVP23AA6NH52 213 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 IGHV2-5P01817 119 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 OTX1P32242 354 aaPredicted RBP27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 OR2T2Q6IF00 324 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 ZNF283Q8N7M2 679 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 OR51L1Q8NGJ5 315 aa27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 PDP1Q9P0J1 537 aaPredicted RBP27.94■■■□□ 2.06
SSSCA1-205ENST00000527920 TANC2Q9HCD6 1990 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 M0R135 149 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 ENTPD1P49961 510 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 BNIP1Q12981 228 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 TMEM179BQ7Z7N9 219 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 ZNF799Q96GE5 643 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 SLC30A2Q9BRI3 323 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 WDR76Q9H967 626 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 TMEM106BQ9NUM4 274 aa27.93■■■□□ 2.06
SSSCA1-205ENST00000527920 H3BN98 237 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 IFNL4K9M1U5 179 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 E2F6O75461 281 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 MALLQ13021 153 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 LYPD4Q6UWN0 246 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 OR5AS1Q8N127 324 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 ITLN1Q8WWA0 313 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 OR2V2Q96R30 315 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 DNAJB9Q9UBS3 223 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 NPTNQ9Y639 398 aa27.92■■■□□ 2.06
SSSCA1-205ENST00000527920 GSC2O15499 205 aa27.91■■■□□ 2.06
SSSCA1-205ENST00000527920 FKBP6O75344 327 aa27.91■■■□□ 2.06
SSSCA1-205ENST00000527920 LCATP04180 440 aa27.91■■■□□ 2.06
SSSCA1-205ENST00000527920 GYPBP06028 91 aa27.91■■■□□ 2.06
SSSCA1-205ENST00000527920 RPS27P42677 84 aaKnown RBP27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms