RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 TMEM183BQ1AE95 376 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ACSM3Q53FZ2 586 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 FBLN7Q53RD9 439 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SOHLH1Q5JUK2 328 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 C1orf189Q5VU69 101 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 PRAMEF9Q5VWM5 478 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 RPL22L1Q6P5R6 122 aaKnown RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 TRIM40Q6P9F5 258 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ARL9Q6T311 187 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 PET117Q6UWS5 81 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ABHD15Q6UXT9 468 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 FRRS1Q6ZNA5 592 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ESPNLQ6ZVH7 1005 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 PLPPR4Q7Z2D5 763 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 FAM129CQ86XR2 697 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SPACA3Q8IXA5 215 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 DEFB106AQ8N104 65 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 IQCF1Q8N6M8 205 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 NPWQ8N729 165 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 EXD3Q8N9H8 876 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 OR4K14Q8NGD5 310 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 OR4D9Q8NGE8 314 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 OR13C5Q8NGS8 318 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 LKAAEAR1Q8TD35 194 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ADAMTS18Q8TE60 1221 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ABHD5Q8WTS1 349 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ABHD3Q8WU67 409 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 MCHR2Q969V1 340 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ZBTB8AQ96BR9 441 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 MOB3AQ96BX8 217 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 MS4A6EQ96DS6 147 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SLC25A38Q96DW6 304 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 MASTLQ96GX5 879 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 IGSF21Q96ID5 467 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SNX22Q96L94 193 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 TSSK3Q96PN8 268 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 NPY6RQ99463 290 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 CMKLR1Q99788 373 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 NDC1Q9BTX1 674 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SGPP1Q9BX95 441 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 NMES1Q9C002 83 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SPATC1LQ9H0A9 340 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 SLC25A51Q9H1U9 297 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 HIPK2Q9H2X6 1198 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 PLK3Q9H4B4 646 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 CXorf36Q9H7Y0 433 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 FBRSQ9HAH7 460 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 CDH20Q9HBT6 801 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 Q9N2J8 555 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 PNO1Q9NRX1 252 aaKnown RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 CLEC5AQ9NY25 188 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 B3GAT1Q9P2W7 334 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 KLK11Q9UBX7 282 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ZNF230Q9UIE0 474 aaPredicted RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 PSG11Q9UQ72 335 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 ST3GAL6Q9Y274 331 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 NOP16Q9Y3C1 178 aaKnown RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 STRAPQ9Y3F4 350 aaKnown RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 CSAG2Q9Y5P2 127 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 HS3ST3B1Q9Y662 390 aa5.23□□□□□ -1.57
CD44-225ENST00000527326 MYO18AQ92614 2054 aaKnown RBP5.23□□□□□ -1.57
CD44-225ENST00000527326 TRPM7Q96QT4 1865 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 COL4A1P02462 1669 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 TRBV24-1A0A075B6N3 115 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 LOC100509620A0A075B734 347 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 A0A1W2PR48 441 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 TLCD2A6NGC4 264 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 C22orf46C9J442 243 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 GAPDHSO14556 408 aaPredicted RBP5.22□□□□□ -1.57
CD44-225ENST00000527326 AGPAT2O15120 278 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 YY2O15391 372 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 SLC25A17O43808 307 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 ZNF354AO60765 605 aaPredicted RBP5.22□□□□□ -1.57
CD44-225ENST00000527326 CTSVO60911 334 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 LRP3O75074 770 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 NDUFS3O75489 264 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 CTAG2O75638 210 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 GLSO94925 669 aaPredicted RBP5.22□□□□□ -1.57
CD44-225ENST00000527326 VAMP5O95183 116 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 GPANK1O95872 356 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 TBX18O95935 607 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 EOMESO95936 686 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 CST4P01036 141 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 TRBC1P01850 177 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 CYC1P08574 325 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 OR5G3P0C626 314 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 OR8U9P0C7N5 309 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 ACP5P13686 325 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 MSR1P21757 451 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 GLRA1P23415 457 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 DGKAP23743 735 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 DPP4P27487 766 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 MC5RP33032 325 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 ARL2P36404 184 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 RND2P52198 227 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 TMEM33P57088 247 aa5.22□□□□□ -1.57
CD44-225ENST00000527326 PCBP3P57721 371 aaKnown RBP5.22□□□□□ -1.57
CD44-225ENST00000527326 YBEYP58557 167 aaPredicted RBP5.22□□□□□ -1.57
CD44-225ENST00000527326 BTG2P78543 158 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms