RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 PNPP00491 289 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 ANPEPP15144 967 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 PCMT1P22061 227 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 NOS3P29474 1203 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 PMELP40967 661 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 RGS6P49758 472 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 MNAT1P51948 309 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 SEC61A1P61619 476 aaKnown RBP8.79□□□□□ -1
PRPF40B-204ENST00000527253 LCN2P80188 198 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 TRIM25Q14258 630 aaKnown RBP8.79□□□□□ -1
PRPF40B-204ENST00000527253 ZMYND11Q15326 602 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 ZMAT1Q5H9K5 638 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 RASSF6Q6ZTQ3 369 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 LRRC28Q86X40 367 aaPredicted RBP8.79□□□□□ -1
PRPF40B-204ENST00000527253 DHFR2Q86XF0 187 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 RFLNBQ8N5W9 214 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 ATG16L2Q8NAA4 619 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 SLC37A3Q8NCC5 494 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 OR8G5Q8NG78 346 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 OR10AD1Q8NGE0 317 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 OR51L1Q8NGJ5 315 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 RAB39BQ96DA2 213 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 COG8Q96MW5 612 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 OR2V2Q96R30 315 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 PITX2Q99697 317 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 GAL3ST1Q99999 423 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 UBAP1Q9NZ09 502 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 OPN4Q9UHM6 478 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 METRNQ9UJH8 293 aa8.79□□□□□ -1
PRPF40B-204ENST00000527253 IGHV3-64DA0A0J9YX35 117 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 IQCF6A8MYZ5 107 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 F5H5K5 113 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 ACOT8O14734 319 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 FAM107AO95990 144 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 HLA-DQA2P01906 255 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 SELEP16581 610 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 ADRA2CP18825 462 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 SLC3A1Q07837 685 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 TRAP1Q12931 704 aaKnown RBP8.78□□□□□ -1
PRPF40B-204ENST00000527253 GK2Q14410 553 aaPredicted RBP8.78□□□□□ -1
PRPF40B-204ENST00000527253 MICAQ29983 383 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 SLC36A3Q495N2 470 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 OR2T5Q6IEZ7 315 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 ARHGAP24Q8N264 748 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 LNX2Q8N448 690 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 AQP11Q8NBQ7 271 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 CCDC197Q8NCU1 140 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 SEMA6DQ8NFY4 1073 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 OR5L1Q8NGL2 311 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 OR9Q1Q8NGQ5 310 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 OR2T29Q8NH02 315 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 ZNF420Q8TAQ5 688 aaPredicted RBP8.78□□□□□ -1
PRPF40B-204ENST00000527253 MEGF10Q96KG7 1140 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 SLC30A2Q9BRI3 323 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 TSSK6Q9BXA6 273 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 NMNAT2Q9BZQ4 307 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 MAGIXQ9H6Y5 334 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 PATZ1Q9HBE1 687 aaKnown RBP8.78□□□□□ -1
PRPF40B-204ENST00000527253 GCM1Q9NP62 436 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 MMP26Q9NRE1 261 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 ARMC1Q9NVT9 282 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 TAS2R1Q9NYW7 299 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 IL19Q9UHD0 177 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 U3KQV3 271 aa8.78□□□□□ -1
PRPF40B-204ENST00000527253 A0A1B0GWJ7 208 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 F5H0A9 414 aaPredicted RBP8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 F5H5P2 479 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 TRAPPC2LH3BP13 241 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 TMEM178BH3BS89 294 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 RGS9O75916 674 aaPredicted RBP8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF205O95201 554 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 SOX14O95416 240 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 FSHBP01225 129 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 HLA-DPB1P04440 258 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 GYPBP06028 91 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 CLUP10909 449 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 TNFRSF1AP19438 455 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 CALB2P22676 271 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 TNFSF4P23510 183 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 MMP16P51512 607 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 BTG1P62324 171 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 CRMP1Q14194 572 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 SNAI3Q3KNW1 292 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 LIPNQ5VXI9 398 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 C1QL2Q7Z5L3 287 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 TMEM179BQ7Z7N9 219 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 ADGRG5Q8IZF4 528 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 LINC00471Q8N535 108 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF511Q8NB15 262 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 BHLHE23Q8NDY6 225 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 OR52L1Q8NGH7 329 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 OR2AJ1Q8NGZ0 328 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 OR13G1Q8NGZ3 307 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 SLCO4A1Q96BD0 722 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 ZNF582Q96NG8 517 aaPredicted RBP8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 ATF6BQ99941 703 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 NIPSNAP1Q9BPW8 284 aa8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 RBM4Q9BWF3 364 aaKnown RBP8.77□□□□□ -1.01
PRPF40B-204ENST00000527253 CDADC1Q9BWV3 514 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms