RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 ZNF556Q9HAH1 456 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 ZNF224Q9NZL3 707 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 ERVK-18Q9QC07 812 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 DUSP13Q9UII6 198 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 SLC13A4Q9UKG4 626 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 FBXL3Q9UKT7 428 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 ZNF346Q9UL40 294 aaKnown RBP10.06□□□□□ -0.8
CAPN1-204ENST00000526468 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.06□□□□□ -0.8
CAPN1-204ENST00000526468 PRELID1Q9Y255 219 aa10.06□□□□□ -0.8
CAPN1-204ENST00000526468 A0A0B4J2E0 115 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 A0A1B0GX12 115 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 ZNF726A6NNF4 738 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 LRRN3E7EW58 273 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 C11orf98E9PRG8 122 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 WNT9BO14905 357 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 WIPF1O43516 503 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SPRY1O43609 319 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-204ENST00000526468 PNPP00491 289 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 IFNA14P01570 189 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 BGLAPP02818 100 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 FAM157BP0CG42 384 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 ARAFP10398 606 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 ZNF35P13682 527 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 EPHA1P21709 976 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 AHCYP23526 432 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 AQP1P29972 269 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 IFNA8P32881 189 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 GGT2P36268 569 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 RGS7BPQ6MZT1 257 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-204ENST00000526468 TMPRSS11AQ6ZMR5 421 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 DEF8Q6ZN54 512 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SLC51BQ86UW2 128 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 RANBP3LQ86VV4 465 aaPredicted RBP10.05□□□□□ -0.8
CAPN1-204ENST00000526468 WDFY1Q8IWB7 410 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 LSMEM1Q8N8F7 131 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 ATG16L2Q8NAA4 619 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SLC7A6Q92536 515 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 GTF2H4Q92759 462 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SLC41A3Q96GZ6 507 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 HYLS1Q96M11 299 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 ARPC5LQ9BPX5 153 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 TMEM246Q9BRR3 403 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SPATA5L1Q9BVQ7 753 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SMURF2Q9HAU4 748 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 TMEM27Q9HBJ8 222 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 SMURF1Q9HCE7 757 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 ACOXLQ9NUZ1 547 aa10.05□□□□□ -0.8
CAPN1-204ENST00000526468 LOC105371242A0A075B767 164 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 TRAV20A0A0B4J274 112 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 LOC102725191A0A1B0GVB3 256 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 MS4A18H0YCH9 400 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 CDC14BO60729 498 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 NOS1APO75052 506 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-204ENST00000526468 RP2O75695 350 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 C1QBP02746 253 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 ADORA3P0DMS8 318 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 HOXB9P17482 250 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-204ENST00000526468 COL8A2P25067 703 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 RORCP51449 518 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 BIDP55957 195 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 MTPNP58546 118 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 CDC42P60953 191 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 RAB1AP62820 205 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 CDK6Q00534 326 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 GLO1Q04760 184 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 DGCR6Q14129 220 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 MS4A18Q3C1V0 323 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 ESCO2Q56NI9 601 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 FAM209AQ5JX71 171 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 AVPI1Q5T686 147 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 TMEM236Q5W0B7 351 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 LAIR2Q6ISS4 152 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 REEP3Q6NUK4 255 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 FAHD2BQ6P2I3 314 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-204ENST00000526468 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 ZNF627Q7L945 461 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 C3orf56Q8N813 242 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 OR10A6Q8NH74 314 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 GCDHQ92947 438 aaPredicted RBP10.04□□□□□ -0.8
CAPN1-204ENST00000526468 FAHD2AQ96GK7 314 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 LRR1Q96L50 414 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 ZNF75AQ96N20 296 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 CDADC1Q9BWV3 514 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 CDH20Q9HBT6 801 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 IMPAD1Q9NX62 359 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 ANGPT4Q9Y264 503 aa10.04□□□□□ -0.8
CAPN1-204ENST00000526468 SAMHD1Q9Y3Z3 626 aaKnown RBP10.04□□□□□ -0.8
CAPN1-204ENST00000526468 A0A0G2JMP0 313 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 A0A0X1KG70 313 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 SNTNA6NMZ2 147 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 TRIM77I1YAP6 450 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 OR6A2O95222 327 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 FARS2O95363 451 aaKnown RBP10.03□□□□□ -0.8
CAPN1-204ENST00000526468 SERPINA1P01009 418 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 IL1AP01583 271 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 SEMG1P04279 462 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 PATE4P0C8F1 98 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 MAGEB1P43366 347 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 RGS6P49758 472 aa10.03□□□□□ -0.8
CAPN1-204ENST00000526468 KLF3P57682 345 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms