RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 UNC119Q13432 240 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 NFATC4Q14934 902 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SWI5Q1ZZU3 235 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 PARM1Q6UWI2 310 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-202ENST00000524773 ISOC2Q96AB3 205 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 CNTNAP3BQ96NU0 1288 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SLCO1B1Q9Y6L6 691 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 TRAV20A0A0B4J274 112 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 A0A1B0GV50 99 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 A0A1W2PPE3 182 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SDCBPO00560 298 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-202ENST00000524773 EFSO43281 561 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF264O43296 627 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 ACAA1P09110 424 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-202ENST00000524773 PSMB6P28072 239 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 CCDC157Q569K6 752 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 VWA2Q5GFL6 755 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SLC25A42Q86VD7 318 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SPAG16Q8N0X2 631 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 RNF128Q8TEB7 428 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 GLYATL2Q8WU03 294 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 SMIM3Q9BZL3 60 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 BANF2Q9H503 90 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
CAPN1-202ENST00000524773 GDF2Q9UK05 429 aaPredicted RBP11.78□□□□□ -0.52
CAPN1-202ENST00000524773 A0A0J9YY10 115 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 A0A1B0GTQ1 180 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 RAB27BO00194 218 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 CD2P06729 351 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 SLC25A4P12235 298 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 CXCR1P25024 350 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 ARRB1P49407 418 aaPredicted RBP11.77□□□□□ -0.52
CAPN1-202ENST00000524773 CCINQ13939 588 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 ZNF345Q14585 488 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 MST1LQ2TV78 715 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 SLC18B1Q6NT16 456 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 DCXRQ7Z4W1 244 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 CCDC36Q8IYA8 594 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 TSLPQ969D9 159 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 RSRP1Q9BUV0 290 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 CYTL1Q9NRR1 136 aa11.77□□□□□ -0.52
CAPN1-202ENST00000524773 PRSS37A4D1T9 235 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 B4DGG1 531 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF432O94892 652 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 CRHP06850 196 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF806P0C7X5 589 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 OR1D4P47884 311 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 PPT1P50897 306 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 RIDAP52758 137 aaKnown RBP11.77□□□□□ -0.53
CAPN1-202ENST00000524773 S100A10P60903 97 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 EBPQ15125 230 aaKnown RBP11.77□□□□□ -0.53
CAPN1-202ENST00000524773 RSPO4Q2I0M5 234 aaPredicted RBP11.77□□□□□ -0.53
CAPN1-202ENST00000524773 Q6ZSR6 202 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 BAP18Q8IXM2 172 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF615Q8N8J6 731 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 PNLDC1Q8NA58 520 aaKnown RBP11.77□□□□□ -0.53
CAPN1-202ENST00000524773 OR13C9Q8NGT0 318 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 MITD1Q8WV92 249 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 C8orf44Q96CB5 159 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 EDEM2Q9BV94 578 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 LAT2Q9GZY6 243 aa11.77□□□□□ -0.53
CAPN1-202ENST00000524773 TMEM269A0A1B0GVZ9 245 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 LRP3O75074 770 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 IFNA6P05013 189 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 HOXB2P14652 356 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 CD80P33681 288 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 KIR2DL1P43626 348 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 GALNTL5Q7Z4T8 443 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 OR13H1Q8NG92 308 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 HOXB13Q92826 284 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ARL11Q969Q4 196 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 CLCC1Q96S66 551 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 SPSB2Q99619 263 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 MESP1Q9BRJ9 268 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ACKR4Q9NPB9 350 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 BIN3Q9NQY0 253 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 TMEM14AQ9Y6G1 99 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 PRSS44E7EML9 344 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 SGCEO43556 437 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF205O95201 554 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 KLF8O95600 359 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 CLPSP04118 112 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 PNMTP11086 282 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 RNH1P13489 461 aaKnown RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 SGCAQ16586 387 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ISXQ2M1V0 245 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ZNF813Q6ZN06 617 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 TAF8Q7Z7C8 310 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 CATSPERDQ86XM0 798 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 C14orf79Q96F83 325 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 SCARF2Q96GP6 870 aaPredicted RBP11.76□□□□□ -0.53
CAPN1-202ENST00000524773 EMC6Q9BV81 110 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 SLC2A4RGQ9NR83 387 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 UBQLN4Q9NRR5 601 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 ASXL3Q9C0F0 2248 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 FRYQ5TBA9 3013 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 A0A1W2PQF6 199 aa11.76□□□□□ -0.53
CAPN1-202ENST00000524773 OR5K4A6NMS3 321 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms