RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SLC7A7Q9UM01 511 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 SAMD4AQ9UPU9 718 aaKnown RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 AP3M1Q9Y2T2 418 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 TMED7Q9Y3B3 224 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 MAGED1Q9Y5V3 778 aaPredicted RBP2.55□□□□□ -2
CSDE1-208ENST00000524652 LYVE1Q9Y5Y7 322 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 ENPP4Q9Y6X5 453 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CUBNO60494 3623 aa2.55□□□□□ -2
CSDE1-208ENST00000524652 CADP27708 2225 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 TGP01266 2768 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 A0A087WZY1 265 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 DHRS12A0PJE2 317 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 TRAPPC13A5PLN9 417 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF716A6NP11 495 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 H3BNH8 94 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 J3QKU1 62 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 KPNA4O00629 521 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 VCYO14598 125 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CDC42EP2O14613 210 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 IMPA2O14732 288 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ADAMDEC1O15204 470 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF208O43345 1280 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CHP2O43745 196 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CXCL13O43927 109 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 FMO6PO60774 539 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SLC19A2O60779 497 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 FKBP6O75344 327 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 AQP8O94778 261 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 OR5F1O95221 314 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 HPRP00739 348 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 BGLAPP02818 100 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 IFNW1P05000 195 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 FABP3P05413 133 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 GPIP06744 558 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 TPOP07202 933 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 IGFBP1P08833 259 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 TSPAN19P0C672 248 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SFTPCP11686 197 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 GP1BBP13224 206 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CPN1P15169 458 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ELK4P28324 431 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CDAP32320 146 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 APOBEC1P41238 236 aaKnown RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 RPS5P46782 204 aaKnown RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 OMPP47874 163 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF41P51814 821 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 POLR2HP52434 150 aaKnown RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 NUP107P57740 925 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 TAS2R41P59536 307 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 LMO4P61968 165 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ELF3P78545 371 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 H3F3AP84243 136 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SPIBQ01892 262 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SRYQ05066 204 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 RUNX1T1Q06455 604 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 MERTKQ12866 999 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SELENBP1Q13228 472 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PON3Q15166 354 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 GUSBP1Q15486 140 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF239Q16600 458 aaKnown RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 EXOC3L2Q2M3D2 409 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 MS4A18Q3C1V0 323 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 TMEM176BQ3YBM2 270 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 GLYR1Q49A26 553 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 ACSF3Q4G176 576 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 KRTCAP3Q53RY4 240 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SYT14P1Q58G82 188 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 C1orf146Q5VVC0 180 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 C1orf140Q5VVS0 124 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SIGIRRQ6IA17 410 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF770Q6IQ21 691 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 C3orf33Q6P1S2 294 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PODNL1Q6PEZ8 512 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF613Q6PF04 617 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 NHLRC1Q6VVB1 395 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF550Q7Z398 422 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PIWIL3Q7Z3Z3 882 aaKnown RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 GRINAQ7Z429 371 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ZNF440Q8IYI8 595 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 EID3Q8N140 333 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 OR9Q2Q8NGE9 314 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 OR52J3Q8NH60 311 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 OR10D3Q8NH80 312 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 FNDC9Q8TBE3 224 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SLC7A13Q8TCU3 470 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 ABHD3Q8WU67 409 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 TMEM239Q8WW34 195 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 RASSF5Q8WWW0 418 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 GEMIN6Q8WXD5 167 aaKnown RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 ROBO4Q8WZ75 1007 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PROX1Q92786 737 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 KLHL15Q96M94 604 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 SFXN2Q96NB2 322 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PKP2Q99959 881 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PSD2Q9BQI7 771 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 PIGQQ9BRB3 760 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 CHID1Q9BWS9 393 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 MMADHCQ9H3L0 296 aaPredicted RBP2.54□□□□□ -2
CSDE1-208ENST00000524652 MUC13Q9H3R2 512 aa2.54□□□□□ -2
CSDE1-208ENST00000524652 MAGIXQ9H6Y5 334 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms