RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 HTR5AP47898 357 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 FGF12P61328 243 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 MAB21L1Q13394 359 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 MEP1BQ16820 701 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 CYBRD1Q53TN4 286 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 RBMS3Q6XE24 437 aaKnown RBP9.19□□□□□ -0.94
CSMD1-210ENST00000521646 PTCHD4Q6ZW05 846 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 MOGAT3Q86VF5 341 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 C1QL4Q86Z23 238 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 SLC25A28Q96A46 364 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 RASD2Q96D21 266 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 MRI1Q9BV20 369 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 PTTG3PQ9NZH4 202 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 IL19Q9UHD0 177 aa9.19□□□□□ -0.94
CSMD1-210ENST00000521646 A0A087WUU8 490 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 KIR2DS1A0A191URI9 304 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ANGPT2O15123 496 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 SGCEO43556 437 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 TSPAN15O95858 294 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 PPIAL4GP0DN37 164 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 COX5BP10606 129 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 PSKH1P11801 424 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 LIPAP38571 399 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 GPR4P46093 362 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 SLC9A3P48764 834 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 SF3A3Q12874 501 aaKnown RBP eCLIP9.18□□□□□ -0.94
CSMD1-210ENST00000521646 MPPED2Q15777 294 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ZNF404Q494X3 552 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ESCO2Q56NI9 601 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 CLEC12AQ5QGZ9 265 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ASPHD2Q6ICH7 369 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 CGB2Q6NT52 195 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 FIP1L1Q6UN15 594 aaKnown RBP9.18□□□□□ -0.94
CSMD1-210ENST00000521646 Q6YL49 198 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 NAA40Q86UY6 237 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 SLC30A8Q8IWU4 369 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 BHLHE23Q8NDY6 225 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 SLC26A7Q8TE54 656 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 RAB40AQ8WXH6 277 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 TSSK2Q96PF2 358 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 TBX15Q96SF7 602 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 GPA33Q99795 319 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 KCNN2Q9H2S1 579 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ZMAT3Q9HA38 289 aaKnown RBP9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ELOVL3Q9HB03 270 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 SMURF1Q9HCE7 757 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 ASH2LQ9UBL3 628 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 CGGBP1Q9UFW8 167 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-210ENST00000521646 OR5V1Q9UGF6 321 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 IL20RAQ9UHF4 553 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 LRCH1Q9Y2L9 728 aa9.18□□□□□ -0.94
CSMD1-210ENST00000521646 A0A0G2JK05 382 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 A0A1B0GW55 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 SRRM5B3KS81 715 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 MELTFP08582 738 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L2P0CJ85 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L3P0CJ86 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L4P0CJ87 422 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L5P0CJ88 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L6P0CJ89 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L7P0CJ90 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 RPS2P15880 293 aaKnown RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 RAD23AP54725 363 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 RAG2P55895 527 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DLX1P56177 255 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 PRB3Q04118 309 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 PRKCDQ05655 676 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 KRTAP27-1Q3LI81 207 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 LRRC23Q53EV4 343 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 INTS11Q5TA45 600 aaKnown RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 AGBL2Q5U5Z8 902 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 PRAMEF6Q5VXH4 476 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 WDR25Q64LD2 544 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 SLC27A4Q6P1M0 643 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 CORO6Q6QEF8 472 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4L9Q6RFH8 374 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 FBXW12Q6X9E4 464 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 CROCCP2Q86T23 111 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 PRRC1Q96M27 445 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 RBP7Q96R05 134 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 SLC30A2Q9BRI3 323 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 SYT4Q9H2B2 425 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 ARMCX1Q9P291 453 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 DUX4Q9UBX2 424 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 COA3Q9Y2R0 106 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-210ENST00000521646 LHFPL6Q9Y693 200 aa9.17□□□□□ -0.94
CSMD1-210ENST00000521646 TEX13CA0A0J9YWL9 993 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 CENPVL3A0A0U1RRI6 287 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 PRSS37A4D1T9 235 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 C12orf71A8MTZ7 269 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 PTP4A3O75365 173 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 TNFRSF1AP19438 455 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 GSTM3P21266 225 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 KDELR2P33947 212 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 CFHR2P36980 270 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 PSMB10P40306 273 aa9.16□□□□□ -0.94
CSMD1-210ENST00000521646 CDKN2AP42771 156 aaKnown RBP9.16□□□□□ -0.94
CSMD1-210ENST00000521646 ARHGDIAP52565 204 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms