RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 CCR9P51686 369 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF121P58317 390 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 RPS25P62851 125 aaKnown RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 FAM27E3Q08E93 113 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 TBC1D28Q2M2D7 210 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 FBXL19-AS1Q494R0 122 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 SOWAHCQ53LP3 525 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 WDR38Q5JTN6 314 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 GPR107Q5VW38 600 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 DMKNQ6E0U4 476 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 COMMD2Q86X83 199 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 WDR31Q8NA23 367 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 SLC30A7Q8NEW0 376 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 OR1J2Q8NGS2 313 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 OR5AK2Q8NH90 309 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 RPS4Y2Q8TD47 263 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 HSD17B8Q92506 261 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 RNASE6Q93091 150 aaKnown RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 PGAM5Q96HS1 289 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 PGLYRP3Q96LB9 341 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 DCLRE1CQ96SD1 692 aaKnown RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 TMED9Q9BVK6 235 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 FUNDC2Q9BWH2 189 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 FAM192AQ9GZU8 254 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 CDH20Q9HBT6 801 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 BRD7Q9NPI1 651 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 B3GNT2Q9NY97 397 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 NUFIP1Q9UHK0 495 aaKnown RBP7.8□□□□□ -1.16
CSMD1-208ENST00000520561 ENPP5Q9UJA9 477 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 OR52A1Q9UKL2 312 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 STUB1Q9UNE7 303 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 SSR3Q9UNL2 185 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 N6AMT1Q9Y5N5 214 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 COL6A6A6NMZ7 2263 aa7.8□□□□□ -1.16
CSMD1-208ENST00000520561 A0A1B0GVI7 797 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 C5orf49A4QMS7 147 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 TBX1O43435 398 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 AIREO43918 545 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SRSF10O75494 262 aaKnown RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 RGS9O75916 674 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 C1QL1O75973 258 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 GABARAPO95166 117 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 PNPP00491 289 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SERPINA3P01011 423 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 HLA-DPB1P04440 258 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SERPINA5P05154 406 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 DBHP09172 617 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 ACSM4P0C7M7 580 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SLC2A1P11166 492 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 PPP3CBP16298 524 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF14P17017 642 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 CCNOP22674 350 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 CCKARP32238 428 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 OTX1P32242 354 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 UGT2B10P36537 528 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 KIR3DL2P43630 455 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 NANOS3P60323 173 aaKnown RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 PPA1Q15181 289 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 KRTAP27-1Q3LI81 207 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 YIF1BQ5BJH7 314 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF704Q6ZNC4 412 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 FAM57BQ71RH2 274 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 CATSPERDQ86XM0 798 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 MS4A15Q8N5U1 240 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 CPEB3Q8NE35 698 aaKnown RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 LILRB4Q8NHJ6 448 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF420Q8TAQ5 688 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 RAB2BQ8WUD1 216 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SLC7A6Q92536 515 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 THRSPQ92748 146 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 GHSRQ92847 366 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 BCL7BQ9BQE9 202 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 CHCHD6Q9BRQ6 235 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 PBOV1Q9GZY1 135 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 OR10A2Q9H208 303 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 EXOSC4Q9NPD3 245 aaKnown RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 KCNJ16Q9NPI9 418 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 G6PC2Q9NQR9 355 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 FRRS1LQ9P0K9 344 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 RSL24D1Q9UHA3 163 aaKnown RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 ZNF281Q9Y2X9 895 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SLC25A15Q9Y619 301 aa7.79□□□□□ -1.16
CSMD1-208ENST00000520561 SIRT4Q9Y6E7 314 aaPredicted RBP7.79□□□□□ -1.16
CSMD1-208ENST00000520561 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 LOC107986453A0A1B0GWG9 222 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 NKX2-6A6NCS4 301 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 A6NHS1 94 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 OR4C45A6NMZ5 311 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 AGFG2O95081 481 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ZFPL1O95159 310 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 IGKV3-15P01624 115 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 TTRP02766 147 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 LCATP04180 440 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 AGAP20933 346 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 ACHEP22303 614 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 MAPK3P27361 379 aaPredicted RBP7.78□□□□□ -1.16
CSMD1-208ENST00000520561 TMBIM6P55061 237 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 SORDQ00796 357 aa7.78□□□□□ -1.16
CSMD1-208ENST00000520561 TAB1Q15750 504 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms