RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 DDX28Q9NUL7 540 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 ACER3Q9NUN7 267 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 NDE1Q9NXR1 346 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ERVK-18Q9QC07 812 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ENPP5Q9UJA9 477 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PACSIN3Q9UKS6 424 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 FOXJ3Q9UPW0 622 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 B3GALT5Q9Y2C3 310 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 AP3M1Q9Y2T2 418 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GRIP1Q9Y3R0 1128 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RNF115Q9Y4L5 304 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 DSPPQ9NZW4 1301 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CNTRLQ7Z7A1 2325 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMED7-TICAM2A0A0A6YYA0 188 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 A0A0J9YW62 118 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 FAM240BA0A1B0GVZ2 78 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 A0A1W2PPV4 95 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMEM129A0AVI4 362 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CD8B2A6NJW9 211 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CPSF4LA6NMK7 179 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 FAM220BPB1ANY3 271 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 EEF1E1-BLOC1S5C9J1V9 151 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SULT2B1O00204 365 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CXCR6O00574 342 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 NME4O00746 187 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ARPC3O15145 178 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 EEF1E1O43324 174 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 EFNA2O43921 213 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TPST2O60704 377 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CLN5O75503 358 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GCM2O75603 506 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 UPK3AO75631 287 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 KRT36O76013 467 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GPANK1O95872 356 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 EPPINO95925 133 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CSN3P07498 182 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZNF44P15621 663 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZNF708P17019 499 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TNFRSF1BP20333 461 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 BMP5P22003 454 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RPS4Y1P22090 263 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 GATA3P23771 443 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CHRNB4P30926 498 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RRM2P31350 389 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 KDELR2P33947 212 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 IER3P46695 156 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GSK3BP49841 420 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ASCL1P50553 236 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 POLR2HP52434 150 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 CTBP2P56545 445 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CLDN18P56856 261 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RGS8P57771 180 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR2B6P58173 313 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SLC34A1Q06495 639 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SRSF1Q07955 248 aaKnown RBP eCLIP2.42□□□□□ -2.02
SKP1-204ENST00000517691 FGL1Q08830 312 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 BNIP2Q12982 314 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SELENBP1Q13228 472 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 VEZF1Q14119 521 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PON3Q15166 354 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 P2RY14Q15391 338 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR1Q1Q15612 314 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 DUSP7Q16829 419 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMEM44Q2T9K0 475 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CYBRD1Q53TN4 286 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 SAMD4BQ5PRF9 694 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 C6orf183Q5T699 404 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 LIPKQ5VXJ0 399 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 PLCXD3Q63HM9 321 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 NSUN5P2Q63ZY6 315 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GLYATQ6IB77 296 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RTL6Q6ICC9 239 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 C3orf33Q6P1S2 294 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 TMEM53Q6P2H8 277 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 DHRS4L2Q6PKH6 230 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 FAM159AQ6UWV7 190 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 HACD2Q6Y1H2 254 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 KCTD8Q6ZWB6 473 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GRINAQ7Z429 371 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 NET1Q7Z628 596 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 VTCN1Q7Z7D3 282 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RANBP3LQ86VV4 465 aaPredicted RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 CALHM3Q86XJ0 350 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 MEX3DQ86XN8 651 aaKnown RBP2.42□□□□□ -2.02
SKP1-204ENST00000517691 ADGRG3Q86Y34 549 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 LACC1Q8IV20 430 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ADGRG5Q8IZF4 528 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 MARVELD2Q8N4S9 558 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 CNEP1R1Q8N9A8 125 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 C9orf106Q8NAJ2 232 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 GJC3Q8NFK1 279 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR13F1Q8NGS4 319 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR10D3Q8NH80 312 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 OR2V1Q8NHB1 315 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ANGPTL6Q8NI99 470 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 FNDC9Q8TBE3 224 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ZPLD1Q8TCW7 415 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 RASSF5Q8WWW0 418 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 ASB5Q8WWX0 329 aa2.42□□□□□ -2.02
SKP1-204ENST00000517691 LZICQ8WZA0 190 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms