RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 TMEM108Q6UXF1 575 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 ZNF627Q7L945 461 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 DPPA2Q7Z7J5 298 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 CPOQ8IVL8 374 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 OR6K6Q8NGW6 343 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 ZNRF4Q8WWF5 429 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 PTP4A1Q93096 173 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 FBXO17Q96EF6 278 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 C14orf79Q96F83 325 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 BOD1Q96IK1 185 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 SNX18Q96RF0 628 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 IL4I1Q96RQ9 567 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 PRRG3Q9BZD7 231 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 TINAGL1Q9GZM7 467 aaPredicted RBP5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 MED20Q9H944 212 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 SLC25A19Q9HC21 320 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 CMC2Q9NRP2 79 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 B3GNT2Q9NY97 397 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 USE1Q9NZ43 259 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 ZNF224Q9NZL3 707 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 POU2F3Q9UKI9 436 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 POLR1DQ9Y2S0 133 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 RNF115Q9Y4L5 304 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 TIMM10BQ9Y5J6 103 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 CACNA1DQ01668 2161 aa5.03□□□□□ -1.6
SCARNA6.1-201ENST00000516989 ABCA4P78363 2273 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 IGLV1-36A0A0B4J1U3 117 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 IGHV1-18A0A0C4DH31 117 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 C9orf118A6NHY6 69 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ZAR1LA6NP61 321 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 B5MCH6 92 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 M0QYG6 137 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 RAB27BO00194 218 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ZNF593O00488 134 aaPredicted RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 RRP9O43818 475 aaKnown RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 PRKYO43930 277 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TMCC2O75069 709 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 GLCEO94923 617 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TNFRSF6BO95407 300 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 SNAP29O95721 258 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 PTHP01270 115 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 IGKV3-15P01624 115 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CRYAAP02489 173 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TFP02787 698 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 SERPINA5P05154 406 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CST2P09228 141 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CECR9P0C854 216 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CCL2P13500 99 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 SPI1P17947 270 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 APLNRP35414 380 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 BLVRAP53004 296 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 PTTG1IPP53801 180 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 KRTAP10-9P60411 292 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 LSM6P62312 80 aaKnown RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 NAAAQ02083 359 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 SCRN3Q0VDG4 424 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ENDOGQ14249 297 aaKnown RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TIGD6Q17RP2 521 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 PABPC1L2AQ5JQF8 200 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 SLX4IPQ5VYV7 408 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ADAM5Q6NVV9 412 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ZNF774Q6NX45 483 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TMEM154Q6P9G4 183 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CORO6Q6QEF8 472 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 B3GLCTQ6Y288 498 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ZNF704Q6ZNC4 412 aaPredicted RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 FOXL2NBQ6ZUU3 175 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CDC20BQ86Y33 519 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 LINC00346Q8IVM7 164 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ZNF555Q8NEP9 628 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 SLC30A7Q8NEW0 376 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 OR1J2Q8NGS2 313 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 OR2AJ1Q8NGZ0 328 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 AKR7LQ8NHP1 331 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TBC1D15Q8TC07 691 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CFHR4Q92496 578 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 AKAP1Q92667 903 aaKnown RBP eCLIP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 NEUROG1Q92886 237 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 NABP1Q96AH0 204 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ZMYND19Q96E35 227 aaPredicted RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 WACQ9BTA9 647 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 HCAR1Q9BXC0 346 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 RACGAP1Q9H0H5 632 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 TOR3AQ9H497 397 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CDH20Q9HBT6 801 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 NOX3Q9HBY0 568 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 MOV10Q9HCE1 1003 aaKnown RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 HINT3Q9NQE9 182 aaKnown RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 IMPAD1Q9NX62 359 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CISD1Q9NZ45 108 aaKnown RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 FAM30AQ9NZY2 134 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 CRNNQ9UBG3 495 aaPredicted RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 FBXL3Q9UKT7 428 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 MOKQ9UQ07 419 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 GMPPBQ9Y5P6 360 aa5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.02□□□□□ -1.61
SCARNA6.1-201ENST00000516989 LOC100130705A0A1B0GUX0 176 aa5.01□□□□□ -1.61
SCARNA6.1-201ENST00000516989 C5orf49A4QMS7 147 aa5.01□□□□□ -1.61
SCARNA6.1-201ENST00000516989 ATP6V1G2-DDX39BF2Z307 99 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms