RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 ZNF354AO60765 605 aaPredicted RBP3.84□□□□□ -1.8
VCAN-209ENST00000513016 TMEM127O75204 238 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 SNCGO76070 127 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 RGPD2P0DJD1 1756 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 ATF1P18846 271 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 RFX2P48378 723 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 OR10A3P58181 314 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 BPIFB3P59826 476 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 ZNF691Q5VV52 312 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 SHEQ5VZ18 495 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 MOB1BQ7L9L4 216 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 TMPRSS7Q7RTY8 843 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 PDZD9Q8IXQ8 264 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 PELI3Q8N2H9 469 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 HPSE2Q8WWQ2 592 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 GHSRQ92847 366 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 MOB3AQ96BX8 217 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 ISOC1Q96CN7 298 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 SSX3Q99909 188 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 THAP7Q9BT49 309 aaPredicted RBP3.84□□□□□ -1.8
VCAN-209ENST00000513016 OR11A1Q9GZK7 315 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 C20orf85Q9H1P6 137 aa3.84□□□□□ -1.8
VCAN-209ENST00000513016 A0A087WUJ7 227 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PHF1O43189 567 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 HLA-DMAP28067 261 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 TLE4Q04727 773 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 HABP2Q14520 560 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 SYT6Q5T7P8 510 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 C19orf48Q6RUI8 117 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 BBS1Q8NFJ9 593 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR10AD1Q8NGE0 317 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR56B4Q8NH76 319 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 GALMQ96C23 342 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 HYLS1Q96M11 299 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 AMBRA1Q9C0C7 1298 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OSGIN1Q9UJX0 560 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PILRBQ9UKJ0 227 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 HSD17B6O14756 317 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 KLK8O60259 260 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ZIC2O95409 532 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 ALDOCP09972 364 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 CALCBP10092 127 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ALDH3B1P43353 468 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ZNF74Q16587 644 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PCK2Q16822 640 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 AARDQ4LEZ3 155 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 COX20Q5RI15 118 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 INO80CQ6PI98 192 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 CYP4V2Q6ZWL3 525 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 MUC20Q8N307 709 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 MFSD4AQ8N468 514 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SLC38A9Q8NBW4 561 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR1S2Q8NGQ3 325 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR13D1Q8NGV5 346 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR51E1Q8TCB6 317 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 CCL17Q92583 94 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FAM3DQ96BQ1 224 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ANKRD60Q9BZ19 345 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR51E2Q9H255 320 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 TMEM231Q9H6L2 316 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 MED20Q9H944 212 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 GPATCH2Q9NW75 528 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR6C3Q9NZP0 311 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ADAM20O43506 726 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 B4GALT1P15291 398 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 KIR2DS2P43631 304 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FZD5Q13467 585 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR10G3Q8NGC4 313 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR2T11Q8NH01 316 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR2T6Q8NHC8 308 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PIK3IP1Q96FE7 263 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 POM121L2Q96KW2 1035 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FUNDC2Q9BWH2 189 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PATZ1Q9HBE1 687 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 BIN3Q9NQY0 253 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 GDF2Q9UK05 429 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 LOC107986453A0A1B0GWG9 222 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ACOD1A6NK06 481 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 AIPO00170 330 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 HMGN4O00479 90 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 HRASP01112 189 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 FBP1P09467 338 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR10J4P0C629 311 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 PPP1CBP62140 327 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ZNF266Q14584 549 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 ETFRF1Q6IPR1 90 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 OR4C3Q8NH37 302 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 GMPPAQ96IJ6 420 aaPredicted RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 ATP5SQ99766 215 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SCPEP1Q9HB40 452 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 EXOSC3Q9NQT5 275 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 NTMQ9P121 344 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 MPC1Q9Y5U8 109 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 IGLV3-16A0A075B6K0 115 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 SMPD2O60906 423 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 DTYMKP23919 212 aa3.83□□□□□ -1.8
VCAN-209ENST00000513016 MDH2P40926 338 aaKnown RBP3.83□□□□□ -1.8
VCAN-209ENST00000513016 TBRG1Q3YBR2 411 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms