RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 MRM2Q9UI43 246 aaKnown RBP9.47□□□□□ -0.89
PFDN1-204ENST00000512707 LSM2Q9Y333 95 aaKnown RBP9.47□□□□□ -0.89
PFDN1-204ENST00000512707 USP9XQ93008 2570 aaPredicted RBP9.46□□□□□ -0.89
PFDN1-204ENST00000512707 ACOD1A6NK06 481 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 F5H5K5 113 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 LOC110117498-PIK3R3F6TDL0 507 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 M0R135 149 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 SYNGR3O43761 229 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ZG16O60844 167 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ADRA2AP08913 450 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 TGM4P49221 684 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 CX3CR1P49238 355 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 RGS6P49758 472 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 MMP16P51512 607 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 RAB39AQ14964 217 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 C3orf36Q3SXR2 165 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ARMCX4Q5H9R4 360 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 SYT6Q5T7P8 510 aaPredicted RBP9.46□□□□□ -0.9
PFDN1-204ENST00000512707 BCL2L15Q5TBC7 163 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 XAF1Q6GPH4 301 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ALKBH2Q6NS38 261 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 DRAM2Q6UX65 266 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 GPR141Q7Z602 305 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 SLC30A7Q8NEW0 376 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 IL17RDQ8NFM7 739 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 OR10S1Q8NGN2 331 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF799Q96GE5 643 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 OR5M11Q96RB7 305 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 DOK1Q99704 481 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF649Q9BS31 505 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 KRTAP3-3Q9BYR6 98 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 KRTAP3-2Q9BYR7 98 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 CDH20Q9HBT6 801 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 PNRC2Q9NPJ4 139 aaKnown RBP9.46□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF224Q9NZL3 707 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 EIF3KQ9UBQ5 218 aaKnown RBP9.46□□□□□ -0.9
PFDN1-204ENST00000512707 SLC25A15Q9Y619 301 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 R4GMQ9 66 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 RELNP78509 3460 aa9.46□□□□□ -0.9
PFDN1-204ENST00000512707 TRBV2A0A0J9YWF9 115 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 A0A1W2PR80 420 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 C5orf49A4QMS7 147 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 NKX2-6A6NCS4 301 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 TMEM212A6NML5 194 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 CCRL2O00421 344 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 MAGEB4O15481 346 aaPredicted RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 NOL3O60936 208 aaKnown RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 INMTO95050 263 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 AGFG2O95081 481 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 ABHD16AO95870 558 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 ANXA2P07355 339 aaKnown RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 CD53P19397 219 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 CELP19835 753 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 CCNOP22674 350 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 PSMA1P25786 263 aaKnown RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 APEX1P27695 318 aaKnown RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 PSMB10P40306 273 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 IDH3GP51553 393 aaPredicted RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 CCR9P51686 369 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 PRKXP51817 358 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 GPR50Q13585 617 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 BLMHQ13867 455 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 TRAM1Q15629 374 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 TIMM50Q3ZCQ8 353 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 FDX2Q6P4F2 183 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 WDR31Q8NA23 367 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 OR52H1Q8NGJ2 320 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 FGFBP3Q8TAT2 258 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 ITLN2Q8WWU7 325 aaPredicted RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 THRSPQ92748 146 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 INTS1Q8N201 2190 aaKnown RBP9.45□□□□□ -0.9
PFDN1-204ENST00000512707 NOTCH2Q04721 2471 aa9.45□□□□□ -0.9
PFDN1-204ENST00000512707 CLEC18AA5D8T8 446 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 PRR32B1ATL7 298 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 J3QW42 95 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 M0R1B8 84 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 GPRIN2O60269 458 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 SERPINA3P01011 423 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 IGKV3-15P01624 115 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CRYAAP02489 173 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 TFAP2AP05549 437 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 UBCP0CG48 685 aaKnown RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CPEP16870 476 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF14P17017 642 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CRYGSP22914 178 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CCKARP32238 428 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 OTX1P32242 354 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF83P51522 516 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF121P58317 390 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 MALLQ13021 153 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 TPBGQ13641 420 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ALKBH1Q13686 389 aaKnown RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CDK5R1Q15078 307 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 TAB1Q15750 504 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 TSTQ16762 297 aaKnown RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 LIPKQ5VXJ0 399 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 TMEM108Q6UXF1 575 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 CLEC18BQ6UXF7 455 aa9.44□□□□□ -0.9
PFDN1-204ENST00000512707 ZNF704Q6ZNC4 412 aaPredicted RBP9.44□□□□□ -0.9
PFDN1-204ENST00000512707 COMMD2Q86X83 199 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms