RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 AP2S1P53680 142 aaPredicted RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 CLDN8P56748 225 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 RAB25P57735 213 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 RPP38P78345 283 aaKnown RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 BTG2P78543 158 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 GALK2Q01415 458 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 SRYQ05066 204 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 NPRL3Q12980 569 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 BAMBIQ13145 260 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 GTF2H2Q13888 395 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 SLC9A3R2Q15599 337 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 CCDC58Q4VC31 144 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 GPAT3Q53EU6 434 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 CDKL4Q5MAI5 379 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 SPANXN4Q5MJ08 99 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 ARMC4Q5T2S8 1044 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 ZFAND6Q6FIF0 208 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 GTF2H2CQ6P1K8 395 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 FAM151BQ6UXP7 276 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 EIF3MQ7L2H7 374 aaKnown RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 GOLGA7Q7Z5G4 137 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 GALNT5Q7Z7M9 940 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 LDB1Q86U70 411 aaPredicted RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 IQCF2Q8IXL9 164 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 ENTHD1Q8IYW4 607 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 RDH10Q8IZV5 341 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 C11orf65Q8NCR3 313 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 B3GNT7Q8NFL0 401 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 OR4F6Q8NGB9 312 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 OR5K2Q8NHB8 316 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 ZNF675Q8TD23 568 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 CD200R1Q8TD46 325 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 SLC7A6Q92536 515 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 CDKN2AIPNLQ96HQ2 116 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 TRNT1Q96Q11 434 aaKnown RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 OR2A5Q96R48 311 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 OR52E6Q96RD3 313 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 GPR21Q99679 349 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 C19orf43Q9BQ61 176 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 TMEM246Q9BRR3 403 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 CDCA4Q9BXL8 241 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 IKZF5Q9H5V7 419 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 C12orf10Q9HB07 376 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 RPRD1BQ9NQG5 326 aaKnown RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 ACOXLQ9NUZ1 547 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 EXD2Q9NVH0 621 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 ADPRHL2Q9NX46 363 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 THUMPD1Q9NXG2 353 aaKnown RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 VNN3Q9NY84 501 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 HSPB7Q9UBY9 170 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 SEC14L4Q9UDX3 406 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 PHF11Q9UIL8 331 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 TBC1D24Q9ULP9 559 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 ASF1AQ9Y294 204 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 POFUT2Q9Y2G5 429 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 SAMHD1Q9Y3Z3 626 aaKnown RBP4.5□□□□□ -1.69
GYPB-212ENST00000511198 OARD1Q9Y530 152 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 HSPG2P98160 4391 aa4.5□□□□□ -1.69
GYPB-212ENST00000511198 LOC105371267A0A1B0GV96 52 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 MEIOCA2RUB1 952 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 CLPSL1A2RUU4 121 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 KRT87PA6NCN2 255 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 ARRDC5A6NEK1 342 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 CCDC182A6NF36 153 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 MYO1GB0I1T2 1018 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 E5RI56 91 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 CLDN34H7C241 214 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 IFNL4K9M1U5 179 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 CCRL2O00421 344 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 OR7A17O14581 309 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 EMC8O43402 210 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 ZFAND5O76080 213 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 LRATO95237 230 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 NSA2O95478 260 aaKnown RBP4.49□□□□□ -1.69
GYPB-212ENST00000511198 ZNF682O95780 498 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 LGI1O95970 557 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 ANXA8P13928 327 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 PRKACGP22612 351 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 RPS3P23396 243 aaKnown RBP eCLIP4.49□□□□□ -1.691e-8■■■■■ 38.6
GYPB-212ENST00000511198 PTBP1P26599 531 aaKnown RBP eCLIP4.49□□□□□ -1.69
GYPB-212ENST00000511198 IFNA8P32881 189 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 ARL1P40616 181 aaPredicted RBP4.49□□□□□ -1.69
GYPB-212ENST00000511198 PRLHRP49683 370 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 RGS4P49798 205 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 CDH11P55287 796 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 PSPHP78330 225 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 IL1RL1Q01638 556 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 TNFRSF17Q02223 184 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 RELQ04864 619 aaPredicted RBP4.49□□□□□ -1.69
GYPB-212ENST00000511198 SCN1BQ07699 218 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 LRRC74AQ0VAA2 488 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 HSPA14Q0VDF9 509 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 RPA4Q13156 261 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 C2orf68Q2NKX9 166 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 GGTA1PQ4G0N0 100 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 RFTN2Q52LD8 501 aaPredicted RBP4.49□□□□□ -1.69
GYPB-212ENST00000511198 SMUG1Q53HV7 270 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 PRAMEF20Q5VT98 475 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 MEDAGQ5VYS4 303 aa4.49□□□□□ -1.69
GYPB-212ENST00000511198 TMEM81Q6P7N7 255 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms