RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 HEXBP07686 556 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 COL9A1P20849 921 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 CASRP41180 1078 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 POLR2HP52434 150 aaKnown RBP13.41□□□□□ -0.26
USP38-202ENST00000510377 ZNF658BQ4V348 819 aaPredicted RBP13.41□□□□□ -0.26
USP38-202ENST00000510377 LPCAT3Q6P1A2 487 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 OR6K3Q8NGY3 331 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 OR52N5Q8NH56 324 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 BMFQ96LC9 184 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 VSTM2LQ96N03 204 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 PLEKHJ1Q9NW61 149 aa13.41□□□□□ -0.26
USP38-202ENST00000510377 A6NIZ1 184 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 C17orf51A8MQB3 221 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 K7EPK0 472 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 RPA2P15927 270 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 DAP3P51398 398 aaKnown RBP13.4□□□□□ -0.26
USP38-202ENST00000510377 CAV2P51636 162 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 SLC25A1P53007 311 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 RAP1BP61224 184 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 RAP1AP62834 184 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 ADAM5Q6NVV9 412 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 C16orf47Q6ZP98 133 aaPredicted RBP13.4□□□□□ -0.26
USP38-202ENST00000510377 FAM71E2Q8N5Q1 922 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 ZNF321PQ8N8H1 164 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 HOXB13Q92826 284 aaPredicted RBP13.4□□□□□ -0.26
USP38-202ENST00000510377 VOPP1Q96AW1 172 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 SEH1LQ96EE3 360 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 SLC46A1Q96NT5 459 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 KCNMB2Q9Y691 235 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 A8MVM7 634 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 ADAP1O75689 374 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 ZNF43P17038 809 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 CPT2P23786 658 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 MFGE8Q08431 387 aaPredicted RBP13.4□□□□□ -0.26
USP38-202ENST00000510377 SGPP2Q8IWX5 399 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 TMEM229BQ8NBD8 167 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 HSD17B11Q8NBQ5 300 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 NANPQ8TBE9 248 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 NUDT9Q9BW91 350 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 RBM24Q9BX46 236 aaKnown RBP13.4□□□□□ -0.26
USP38-202ENST00000510377 NIT2Q9NQR4 276 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 SHISA8B8ZZ34 492 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 CTHP32929 405 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 SULF2Q8IWU5 870 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 C1orf198Q9H425 327 aa13.4□□□□□ -0.26
USP38-202ENST00000510377 UBE2ZQ9H832 354 aaPredicted RBP13.4□□□□□ -0.26
USP38-202ENST00000510377 CCNOP22674 350 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 HSD17B7P56937 341 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 ZNF529Q6P280 563 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 OR5M8Q8NGP6 311 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 OR1S1Q8NH92 325 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 TCTN2Q96GX1 697 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 PRMT8Q9NR22 394 aaPredicted RBP13.39□□□□□ -0.27
USP38-202ENST00000510377 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 NSA2O95478 260 aaKnown RBP13.39□□□□□ -0.27
USP38-202ENST00000510377 HERV-K104P61576 105 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 C1orf53Q5VUE5 145 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 CMSS1Q9BQ75 279 aaKnown RBP13.39□□□□□ -0.27
USP38-202ENST00000510377 PILRAQ9UKJ1 303 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 PUS1Q9Y606 427 aaKnown RBP eCLIP13.39□□□□□ -0.27
USP38-202ENST00000510377 METTL12A8MUP2 240 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 J3QRE1 110 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 ZNF117Q03924 483 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 ZNF160Q9HCG1 818 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 KCNJ16Q9NPI9 418 aa13.39□□□□□ -0.27
USP38-202ENST00000510377 FAM230AA0A1W2PPH8 454 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 GLAP06280 429 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 CT45A8P0DMV1 189 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 CT45A9P0DMV2 189 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 OMGP23515 440 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 KIR3DL2P43630 455 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 GUCA2BQ16661 112 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 CT45A2Q5DJT8 189 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 EMC4Q5J8M3 183 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 CDC20BQ86Y33 519 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 BATF2Q8N1L9 274 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 OR1M1Q8NGA1 313 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 TCEAL3Q969E4 200 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 S100PBPQ96BU1 408 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 ZNF175Q9Y473 711 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 MED19A0JLT2 244 aaPredicted RBP13.38□□□□□ -0.27
USP38-202ENST00000510377 PRR32B1ATL7 298 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 NME2P1O60361 137 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 PPICP45877 212 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 FAM189A2Q15884 450 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 ZNF141Q15928 474 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 P4HA3Q7Z4N8 544 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 FGF11Q92914 225 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 PIGTQ969N2 578 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 TAF9BQ9HBM6 251 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 ZNF749O43361 778 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 LRP3O75074 770 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 UPK3AO75631 287 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 S100A2P29034 98 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 YPEL5P62699 121 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 LRRC18Q8N456 261 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 DDIT4LQ96D03 193 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 SLAMF6Q96DU3 332 aa13.38□□□□□ -0.27
USP38-202ENST00000510377 MRPS24Q96EL2 167 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms