RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 GABRB1P18505 474 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 COL8A2P25067 703 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 STOMP27105 288 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 APLNRP35414 380 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 NAA10P41227 235 aaPredicted RBP7.41□□□□□ -1.22
SNCA-211ENST00000508895 HTR5AP47898 357 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 PLP2Q04941 152 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 SLC34A1Q06495 639 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 TBC1D28Q2M2D7 210 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 KRTAP27-1Q3LI81 207 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 ELFN2Q5R3F8 820 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 NXNL2Q5VZ03 156 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 ERI1Q8IV48 349 aaKnown RBP7.41□□□□□ -1.22
SNCA-211ENST00000508895 RFLNBQ8N5W9 214 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 OR8J1Q8NGP2 316 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 OR6N2Q8NGY6 317 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 ST7LQ8TDW4 575 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 FAM168AQ92567 244 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 YIPF5Q969M3 257 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 UBE2FQ969M7 185 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 MRPL24Q96A35 216 aaKnown RBP7.41□□□□□ -1.22
SNCA-211ENST00000508895 AMELYQ99218 206 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 KCNS3Q9BQ31 491 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 HDHD2Q9H0R4 259 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 C8orf4Q9NR00 106 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 DDX28Q9NUL7 540 aaKnown RBP7.41□□□□□ -1.22
SNCA-211ENST00000508895 FAM118AQ9NWS6 357 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 PLEK2Q9NYT0 353 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 AASSQ9UDR5 926 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 ATPIF1Q9UII2 106 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 KLHDC2Q9Y2U9 406 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 GMPPBQ9Y5P6 360 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 WNK2Q9Y3S1 2297 aa7.41□□□□□ -1.22
SNCA-211ENST00000508895 C5orf49A4QMS7 147 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 LRP5LA4QPB2 252 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 PRR32B1ATL7 298 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 SLC16A6O15403 523 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 ICMTO60725 284 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 CLIC3O95833 236 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 MRPL3P09001 348 aaKnown RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 NAT2P11245 290 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 ZNF823P16415 610 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 GLRXP35754 106 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 MAGEB1P43366 347 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 PPOXP50336 477 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 GDI2P50395 445 aaKnown RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 BLVRAP53004 296 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 RPS7P62081 194 aaKnown RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 RIPK1Q13546 671 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 CARTPTQ16568 116 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 RSPO1Q2MKA7 263 aaPredicted RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 TMEM249Q2WGJ8 235 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 TEX30Q5JUR7 227 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 SPATA46Q5T0L3 261 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 LCN1P1Q5VSP4 162 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 TMEM154Q6P9G4 183 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 CLEC2AQ6UVW9 174 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 DPY19L4Q7Z388 723 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 DCXRQ7Z4W1 244 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 GID4Q8IVV7 300 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 ENTHD1Q8IYW4 607 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 GJC3Q8NFK1 279 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 IL17RDQ8NFM7 739 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 OR1F12Q8NHA8 337 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 SPATA3Q8NHX4 192 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 APH1BQ8WW43 257 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 ZNF582Q96NG8 517 aaPredicted RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 CNN2Q99439 309 aaKnown RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 COQ7Q99807 217 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 ATF6BQ99941 703 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 RHNO1Q9BSD3 238 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 ADI1Q9BV57 179 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 BPESC1Q9GZL8 116 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 CDH20Q9HBT6 801 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 BARX1Q9HBU1 254 aaPredicted RBP7.4□□□□□ -1.22
SNCA-211ENST00000508895 ADGRL4Q9HBW9 690 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 IMPAD1Q9NX62 359 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 COPS3Q9UNS2 423 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 CMAHPQ9Y471 501 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 CACNG2Q9Y698 323 aa7.4□□□□□ -1.22
SNCA-211ENST00000508895 LOC100130705A0A1B0GUX0 176 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 C5orf63A6NC05 138 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 SLC22A31A6NKX4 558 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 ZNF593O00488 134 aaPredicted RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 CD5LO43866 347 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 LILRA1O75019 489 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 APOL3O95236 402 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 PTHP01270 115 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 GNAO1P09471 354 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 ZNF16P17020 682 aaPredicted RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 OTX1P32242 354 aaPredicted RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 NR4A2P43354 598 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 AQP4P55087 323 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 SNRPGP62308 76 aaKnown RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 SNRPD2P62316 118 aaKnown RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 ADARB1P78563 741 aaKnown RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 GALK2Q01415 458 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 LOXL1Q08397 574 aaPredicted RBP7.39□□□□□ -1.23
SNCA-211ENST00000508895 RIN1Q13671 783 aa7.39□□□□□ -1.23
SNCA-211ENST00000508895 EIF2B1Q14232 305 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms