RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 MGAT4BQ9UQ53 548 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 FAM32AQ9Y421 112 aaKnown RBP3.9□□□□□ -1.79
NUP54-206ENST00000508465 ENPP4Q9Y6X5 453 aa3.9□□□□□ -1.79
NUP54-206ENST00000508465 ARPC4-TTLL3A0A0A6YYG9 625 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IGKV1D-43A0A0B4J1Z2 117 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IGHV2OR16-5A0A0B4J2B6 119 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 TMEM129A0AVI4 362 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 HMX3A6NHT5 357 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MCIDASD6RGH6 385 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 LYNX1G3V0Z9 82 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 H7C1C5 153 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CDC42EP2O14613 210 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IMPA2O14732 288 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 DHHO43323 396 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 DCTN3O75935 186 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PDE5AO76074 875 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MPZL1O95297 269 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 TNFRSF6BO95407 300 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IGLV1-44P01699 117 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CRYAAP02489 173 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MT-ND5P03915 603 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 H1F0P07305 194 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 OR4A8P0C604 315 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PGA4P0DJD7 388 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PGA3P0DJD8 388 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 OR8G3PP0DMU2 310 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 LYNX1P0DP58 116 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 THRBP10828 461 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 APEHP13798 732 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 PAX1P15863 534 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IFNA8P32881 189 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RPL4P36578 427 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 SLC9A3P48764 834 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 SH3BGRP55822 239 aaPredicted RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 UCP3P55916 312 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RPL27P61353 136 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 LCN6P62502 163 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 VLDLRP98155 873 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PRKCDQ05655 676 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 FMODQ06828 376 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PPP1R8Q12972 351 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 RAB32Q13637 225 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RAB35Q15286 201 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 ADIPOQQ15848 244 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CARTPTQ16568 116 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 HIST3H3Q16695 136 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 GSG1Q2KHT4 349 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 ALKBH6Q3KRA9 238 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IQCCQ4KMZ1 466 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 ALG10Q5BKT4 473 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 FGD3Q5JSP0 725 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 SAMD4BQ5PRF9 694 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 ARMC4Q5T2S8 1044 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 C11orf71Q6IPW1 123 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 KRT80Q6KB66 452 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PRSS57Q6UWY2 283 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CLEC9AQ6UXN8 241 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 GSG1LQ6UXU4 331 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MBOAT2Q6ZWT7 520 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RRM2BQ7LG56 351 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CYP4Z1Q86W10 505 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CDK20Q8IZL9 346 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 LRRC75A-AS1Q8N1F1 130 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 SVOPLQ8N434 492 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 SLC22A24Q8N4F4 322 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PAQR4Q8N4S7 273 aaPredicted RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 CCDC197Q8NCU1 140 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 AKR7LQ8NHP1 331 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 SLC7A13Q8TCU3 470 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MAGEE2Q8TD90 523 aaPredicted RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 IPCEF1Q8WWN9 437 aaPredicted RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 ACOT11Q8WXI4 607 aaPredicted RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 SLC25A28Q96A46 364 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 TRMT61AQ96FX7 289 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 PYURFQ96I23 114 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 PRRC1Q96M27 445 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 ADAD1Q96M93 576 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 ZNF75AQ96N20 296 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 SEPHS2Q99611 448 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MRPL13Q9BYD1 178 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 REG4Q9BYZ8 158 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 TXNIPQ9H3M7 391 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RERGLQ9H628 205 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RNF121Q9H920 327 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CA10Q9NS85 328 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CBLN4Q9NTU7 201 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 TBC1D23Q9NUY8 699 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 FAIMQ9NVQ4 179 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 TMEM38BQ9NVV0 291 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 GAR1Q9NY12 217 aaKnown RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 ZNF224Q9NZL3 707 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 CRNNQ9UBG3 495 aaPredicted RBP3.89□□□□□ -1.79
NUP54-206ENST00000508465 ABCD2Q9UBJ2 740 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 MGAT4CQ9UBM8 478 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RPS6KA6Q9UK32 745 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 ADAM18Q9Y3Q7 739 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 UGT2A1Q9Y4X1 527 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 IER3IP1Q9Y5U9 82 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RTTNQ86VV8 2226 aa3.89□□□□□ -1.79
NUP54-206ENST00000508465 RAI1Q7Z5J4 1906 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms