RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 TUSC1Q2TAM9 212 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 KLF17Q5JT82 389 aaPredicted RBP11.03□□□□□ -0.64
DDX41-204ENST00000504807 FAM201AQ5SY85 155 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 ZNF770Q6IQ21 691 aaPredicted RBP11.03□□□□□ -0.64
DDX41-204ENST00000504807 CYP2R1Q6VVX0 501 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 FBXW12Q6X9E4 464 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 ZBTB46Q86UZ6 589 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 DEFB107AQ8IZN7 70 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 CYB561A3Q8NBI2 242 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 BHLHE23Q8NDY6 225 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 DVL3Q92997 716 aaPredicted RBP11.03□□□□□ -0.64
DDX41-204ENST00000504807 RAB39BQ96DA2 213 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 NSMCE2Q96MF7 247 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 PKP2Q99959 881 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 WACQ9BTA9 647 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 GCM1Q9NP62 436 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 IL1RAPQ9NPH3 570 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 TAGLN3Q9UI15 199 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 LYVE1Q9Y5Y7 322 aa11.03□□□□□ -0.64
DDX41-204ENST00000504807 BHLHE40O14503 412 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 ATP8B1O43520 1251 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 OR10H3O60404 316 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 CYB5R3P00387 301 aaPredicted RBP11.02□□□□□ -0.65
DDX41-204ENST00000504807 HLA-DPB1P04440 258 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 FABP3P05413 133 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 ACSM4P0C7M7 580 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 LIPAP38571 399 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 CLEC12AQ5QGZ9 265 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 DCAF12L2Q5VW00 463 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 CPLX4Q7Z7G2 160 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 ZDHHC21Q8IVQ6 265 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 C1orf174Q8IYL3 243 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 FITM2Q8N6M3 262 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 OR52E2Q8NGJ4 325 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 PTP4A1Q93096 173 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 MEGF10Q96KG7 1140 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 DIRC2Q96SL1 478 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 COQ7Q99807 217 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 IFT27Q9BW83 186 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 C1QTNF5Q9BXJ0 243 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 EGLN1Q9GZT9 426 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 CGGBP1Q9UFW8 167 aaPredicted RBP11.02□□□□□ -0.65
DDX41-204ENST00000504807 CYB5R1Q9UHQ9 305 aa11.02□□□□□ -0.65
DDX41-204ENST00000504807 A0A0G2JMP0 313 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 A0A0X1KG70 313 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 A0A1B0GWJ7 208 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 TVP23AA6NH52 213 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 F5H5P2 479 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 TMEM178BH3BS89 294 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 GASTP01350 101 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 RAC2P15153 192 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 PCMT1P22061 227 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 SLC6A6P31641 620 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 SLC6A9P48067 706 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 BTG1P62324 171 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 MS4A2Q01362 244 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 PAX2Q02962 417 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDX41-204ENST00000504807 TSPAN31Q12999 210 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 KRT72Q14CN4 511 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 SAMD4BQ5PRF9 694 aaKnown RBP11.01□□□□□ -0.65
DDX41-204ENST00000504807 SHQ1Q6PI26 577 aaKnown RBP11.01□□□□□ -0.65
DDX41-204ENST00000504807 ARL9Q6T311 187 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 UNQ6126/PRO20091Q6UXV3 157 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 LRRC28Q86X40 367 aaPredicted RBP11.01□□□□□ -0.65
DDX41-204ENST00000504807 BCL6BQ8N143 479 aaPredicted RBP11.01□□□□□ -0.65
DDX41-204ENST00000504807 ZDHHC22Q8N966 263 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 C19orf18Q8NEA5 215 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 OR8G5Q8NG78 346 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 OR4M2Q8NGB6 313 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 OR51L1Q8NGJ5 315 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 OR4Q3Q8NH05 313 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 TAF15Q92804 592 aaKnown RBP eCLIP11.01□□□□□ -0.65
DDX41-204ENST00000504807 TIMD4Q96H15 378 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 C1orf147Q96MC9 270 aaPredicted RBP11.01□□□□□ -0.65
DDX41-204ENST00000504807 SLC30A2Q9BRI3 323 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 HDHD2Q9H0R4 259 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 C7orf69Q9H7B7 122 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 PATZ1Q9HBE1 687 aaKnown RBP11.01□□□□□ -0.65
DDX41-204ENST00000504807 IL19Q9UHD0 177 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 ATPIF1Q9UII2 106 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 POLR1DQ9Y2S0 133 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 ARL2BPQ9Y2Y0 163 aa11.01□□□□□ -0.65
DDX41-204ENST00000504807 CEACAM18A8MTB9 384 aa11□□□□□ -0.65
DDX41-204ENST00000504807 IQCF6A8MYZ5 107 aa11□□□□□ -0.65
DDX41-204ENST00000504807 T-ENOLP0DO92 83 aa11□□□□□ -0.65
DDX41-204ENST00000504807 CLUP10909 449 aa11□□□□□ -0.65
DDX41-204ENST00000504807 NOS3P29474 1203 aa11□□□□□ -0.65
DDX41-204ENST00000504807 CRABP1P29762 137 aa11□□□□□ -0.65
DDX41-204ENST00000504807 MAGEA2P43356 314 aa11□□□□□ -0.65
DDX41-204ENST00000504807 HMGA2P52926 109 aa11□□□□□ -0.65
DDX41-204ENST00000504807 TRAP1Q12931 704 aaKnown RBP11□□□□□ -0.65
DDX41-204ENST00000504807 SCGB2A2Q13296 93 aa11□□□□□ -0.65
DDX41-204ENST00000504807 MAB21L1Q13394 359 aa11□□□□□ -0.65
DDX41-204ENST00000504807 GK2Q14410 553 aaPredicted RBP11□□□□□ -0.65
DDX41-204ENST00000504807 SNAI3Q3KNW1 292 aa11□□□□□ -0.65
DDX41-204ENST00000504807 ZMAT1Q5H9K5 638 aa11□□□□□ -0.65
DDX41-204ENST00000504807 JAZF1Q86VZ6 243 aa11□□□□□ -0.65
DDX41-204ENST00000504807 ATG16L2Q8NAA4 619 aa11□□□□□ -0.65
DDX41-204ENST00000504807 GJC3Q8NFK1 279 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms