RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 HIST2H3PS2Q5TEC6 136 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 Q6ZR03 302 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 HIST2H3AQ71DI3 136 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 NAA40Q86UY6 237 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 LNX2Q8N448 690 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 ATG16L2Q8NAA4 619 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 OR5L1Q8NGL2 311 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 HPS1Q92902 700 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 POP5Q969H6 163 aaKnown RBP12.1□□□□□ -0.47
HOXC9-202ENST00000504557 APOBEC3DQ96AK3 386 aaPredicted RBP12.1□□□□□ -0.47
HOXC9-202ENST00000504557 TIMD4Q96H15 378 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 DCAF16Q9NXF7 216 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 UBAP1Q9NZ09 502 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 KLHL21Q9UJP4 597 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 ZDHHC8Q9ULC8 765 aa12.1□□□□□ -0.47
HOXC9-202ENST00000504557 TIPRLO75663 272 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 IFNA2P01563 188 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 IFNGP01579 166 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 ZNF3P17036 446 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 SPI1P17947 270 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 SRD5A1P18405 259 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 HNF1AP20823 631 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 TNFSF4P23510 183 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 FMO3P31513 532 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 TAF13Q15543 124 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 ZNF362Q5T0B9 420 aaPredicted RBP12.09□□□□□ -0.47
HOXC9-202ENST00000504557 DCXRQ7Z4W1 244 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 OR10AD1Q8NGE0 317 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 ITLN1Q8WWA0 313 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 PTP4A1Q93096 173 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 HAVCR1Q96D42 359 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 MAP6Q96JE9 813 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 COG8Q96MW5 612 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 CADM1Q9BY67 442 aaKnown RBP12.09□□□□□ -0.47
HOXC9-202ENST00000504557 ZNF556Q9HAH1 456 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 CENPMQ9NSP4 180 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 CYB5R1Q9UHQ9 305 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 BAIAP2Q9UQB8 552 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 WIPI2Q9Y4P8 454 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 COMMD3-BMI1R4GMX3 469 aa12.09□□□□□ -0.47
HOXC9-202ENST00000504557 GSC2O15499 205 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 ACSM4P0C7M7 580 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 FAM157CP0CG43 387 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 KITLGP21583 273 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 PRKXP51817 358 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 RSPO1Q2MKA7 263 aaPredicted RBP12.08□□□□□ -0.48
HOXC9-202ENST00000504557 GLCCI1Q86VQ1 547 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 OR10S1Q8NGN2 331 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 RAB1CQ92928 201 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 DDOQ99489 341 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 MDFIQ99750 246 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 GAL3ST1Q99999 423 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 COPS4Q9BT78 406 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 RBM4Q9BWF3 364 aaKnown RBP12.08□□□□□ -0.48
HOXC9-202ENST00000504557 HCAR1Q9BXC0 346 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 OR51V1Q9H2C8 321 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF665Q9H7R5 613 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 YY1AP1Q9H869 796 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 PNRC2Q9NPJ4 139 aaKnown RBP12.08□□□□□ -0.48
HOXC9-202ENST00000504557 KIF17Q9P2E2 1029 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 LPAR3Q9UBY5 353 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 CGGBP1Q9UFW8 167 aaPredicted RBP12.08□□□□□ -0.48
HOXC9-202ENST00000504557 ATPIF1Q9UII2 106 aa12.08□□□□□ -0.48
HOXC9-202ENST00000504557 TMEFF2Q9UIK5 374 aaPredicted RBP12.08□□□□□ -0.48
HOXC9-202ENST00000504557 DOCK11Q5JSL3 2073 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 B4DSR2 109 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 H0YL77 283 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 M0R135 149 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF593O00488 134 aaPredicted RBP12.07□□□□□ -0.48
HOXC9-202ENST00000504557 SBK2P0C263 348 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 SLC2A1P11166 492 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 RAC2P15153 192 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 TUBG1P23258 451 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 SRP14P37108 136 aaKnown RBP12.07□□□□□ -0.48
HOXC9-202ENST00000504557 ENTPD1P49961 510 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 TPTEP56180 551 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 LMO4P61968 165 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 SRSF2Q01130 221 aaKnown RBP12.07□□□□□ -0.48
HOXC9-202ENST00000504557 BNIP1Q12981 228 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 ECH1Q13011 328 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 CDK5R2Q13319 367 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 GINS1Q14691 196 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 PEG10Q86TG7 708 aaKnown RBP12.07□□□□□ -0.48
HOXC9-202ENST00000504557 ERI1Q8IV48 349 aaKnown RBP12.07□□□□□ -0.48
HOXC9-202ENST00000504557 OR6N2Q8NGY6 317 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 SPTSSAQ969W0 71 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 SLCO4A1Q96BD0 722 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF799Q96GE5 643 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 ZNF582Q96NG8 517 aaPredicted RBP12.07□□□□□ -0.48
HOXC9-202ENST00000504557 OR2V2Q96R30 315 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 DIRC2Q96SL1 478 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 TUBG2Q9NRH3 451 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 CMC2Q9NRP2 79 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 HIF1ANQ9NWT6 349 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 TMEM160Q9NX00 188 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 DNAJB9Q9UBS3 223 aa12.07□□□□□ -0.48
HOXC9-202ENST00000504557 TCRBV3S1A0A5B6 114 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 HLA-DPB1P04440 258 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 MSMBP08118 114 aa12.06□□□□□ -0.48
HOXC9-202ENST00000504557 TNFRSF1AP19438 455 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms