RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 FLVCR1Q9Y5Y0 555 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 JTBO76095 146 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 GABRB1P18505 474 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 DND1Q8IYX4 353 aaKnown RBP14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 CPEB3Q8NE35 698 aaKnown RBP14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 MN1Q10571 1320 aaPredicted RBP14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 IGLV3-16A0A075B6K0 115 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 RNF4P78317 190 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 CLN3Q13286 438 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 ACOT7LQ6ZUV0 252 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 KPTNQ9Y664 436 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 LY75O60449 1722 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 A0A0A6YYJ9 748 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 MAGEB4O15481 346 aaPredicted RBP14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 SOX18P35713 384 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 KIR2DL3P43628 341 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 OR8G2PQ6IF36 304 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 UBALD2Q8IYN6 164 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 CISD2Q8N5K1 135 aaKnown RBP14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 KIAA1958Q8N8K9 716 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 HPSE2Q8WWQ2 592 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 NTN4Q9HB63 628 aa14.99□□□□□ -0.01
PCDHA1-203ENST00000504120 TRAV1-2A0A0B4J238 106 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 LGALS8O00214 317 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 TGFBR1P36897 503 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 TAGLN2P37802 199 aaKnown RBP14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 RAD52P43351 418 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 CLDN20P56880 219 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SCCPDHQ8NBX0 429 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SFT2D1Q8WV19 159 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SHARPINQ9H0F6 387 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 DEFB127Q9H1M4 99 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SNRPGP15A8MWD9 76 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 LMO7DNF2Z398 122 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 TBX19O60806 448 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 MCCD1P59942 119 aaPredicted RBP14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 AARDQ4LEZ3 155 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 TMEM41BQ5BJD5 291 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 RNF165Q6ZSG1 346 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 OR2G2Q8NGZ5 317 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SARAFQ96BY9 339 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 ARSGQ96EG1 525 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF416Q9BWM5 594 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 QPCTLQ9NXS2 382 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SLC22A13Q9Y226 551 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 LOXL2Q9Y4K0 774 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 CXCL13O43927 109 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 SSBP1Q04837 148 aaKnown RBP14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 HABP2Q14520 560 aaPredicted RBP14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 FOXB2Q5VYV0 432 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 ISG20L2Q9H9L3 353 aaKnown RBP14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 B9D1Q9UPM9 204 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 METTL12A8MUP2 240 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 MT-ND4LP03901 98 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 EPHA2P29317 976 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 GSK3AP49840 483 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 PPIAP62937 165 aaKnown RBP14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 REEP6Q96HR9 211 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 AKIP1Q9NQ31 210 aa14.98□□□□□ -0.01
PCDHA1-203ENST00000504120 A0A1B0GUH1 482 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 SUB1P53999 127 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 ZNF626Q68DY1 528 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 CCDC74BQ96LY2 380 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 FOXQ1Q9C009 403 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 RIMS4Q9H426 269 aaPredicted RBP14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 CRLF2Q9HC73 371 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 GON4LQ3T8J9 2241 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 C5orf49A4QMS7 147 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 ANKUB1A6NFN9 424 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 H2AFB1P0C5Y9 115 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 PSMB6P28072 239 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 C12orf73Q69YU5 71 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 LIMS2Q7Z4I7 341 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 LSRQ86X29 649 aaPredicted RBP14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 ETFBKMTQ8IXQ9 262 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 PRDM7Q9NQW5 492 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 SLCO1C1Q9NYB5 712 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 A4GNTQ9UNA3 340 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 SCGB1D1O95968 90 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 FABP1P07148 127 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 ADIRFQ15847 76 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 PRAMEF5Q5TYX0 476 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 PRAMEF6Q5VXH4 476 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 FAM122CQ6P4D5 195 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 GNPNAT1Q96EK6 184 aaPredicted RBP14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 C20orf202A1L168 122 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 RPS27P42677 84 aaKnown RBP14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 FAM199XQ6PEV8 388 aaPredicted RBP14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 ZPBPQ9BS86 351 aa14.97□□□□□ -0.01
PCDHA1-203ENST00000504120 ZFP92A6NM28 416 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 CBR3O75828 277 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 NDUFB7P17568 137 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 CMTM2Q8TAZ6 248 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 PCED1AQ9H1Q7 454 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 DHHO43323 396 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 ZIC2O95409 532 aaPredicted RBP14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 HIST2H3AQ71DI3 136 aa14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 PATZ1Q9HBE1 687 aaKnown RBP14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 GDF2Q9UK05 429 aaPredicted RBP14.96□□□□□ -0.01
PCDHA1-203ENST00000504120 DEFA4P12838 97 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms