RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 TMEM165Q9HC07 324 aa2.11□□□□□ -2.07
CDC42SE2-204ENST00000502639 FBXO6Q9NRD1 293 aaPredicted RBP2.11□□□□□ -2.07
CDC42SE2-204ENST00000502639 CCDC59Q9P031 241 aaKnown RBP2.11□□□□□ -2.07
CDC42SE2-204ENST00000502639 TRMT112Q9UI30 125 aaKnown RBP2.11□□□□□ -2.07
CDC42SE2-204ENST00000502639 HYOU1Q9Y4L1 999 aa2.11□□□□□ -2.07
CDC42SE2-204ENST00000502639 KRBOX1C9JBD0 128 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 C9JVG2 144 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 PLPP1O14494 284 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 NDUFAB1O14561 156 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 CIB2O75838 187 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 OR2F2O95006 317 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 HLA-DQB1P01920 261 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 FTH1P02794 183 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 IL4P05112 153 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 PRRX1P54821 245 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 SYNJ2BPP57105 145 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 RPL23P62829 140 aaKnown RBP2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 TGM3Q08188 693 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 KIR2DS1Q14954 304 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 TRAM2Q15035 370 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 TCEAL5Q5H9L2 206 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 C1orf185Q5T7R7 199 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 SNX20Q7Z614 316 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 CMC1Q7Z7K0 106 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 LYPD6BQ8NI32 183 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 TCEAL3Q969E4 200 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 SLC38A4Q969I6 547 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 ZNF717Q9BY31 904 aaPredicted RBP2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 PTTG3PQ9NZH4 202 aa2.1□□□□□ -2.07
CDC42SE2-204ENST00000502639 SMCO3A2RU48 225 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 RAD51CO43502 376 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 SEMA3DO95025 777 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 OXTP01178 125 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 BCKDHBP21953 392 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 RRM2P31350 389 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 BMI1P35226 326 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 CCNA1P78396 465 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 LIPEQ05469 1076 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 DGCR6Q14129 220 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 ZNF266Q14584 549 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 MBOAT2Q6ZWT7 520 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 NKAIN4Q8IVV8 208 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 TMEM256Q8N2U0 113 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 GPR26Q8NDV2 337 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 OR11H7Q8NGC8 314 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 APH1BQ8WW43 257 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 NRGNQ92686 78 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 PANX1Q96RD7 426 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 CCDC77Q9BR77 488 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 C20orf24Q9BUV8 137 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 BEX1Q9HBH7 125 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 SLC17A7Q9P2U7 560 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 COMMD3-BMI1R4GMX3 469 aa2.09□□□□□ -2.07
CDC42SE2-204ENST00000502639 PCDH11XQ9BZA7 1347 aa2.09□□□□□ -2.08
CDC42SE2-204ENST00000502639 SMIM26A0A096LP01 95 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 IGHV3-72A0A0B4J1Y9 119 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 GABRR3A8MPY1 467 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 SLC9A3R1O14745 358 aaPredicted RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 NMT2O60551 498 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 CD160O95971 181 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 ZNF688P0C7X2 276 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 CSNK2A2P19784 350 aaPredicted RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 ME2P23368 584 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 OTX1P32242 354 aaPredicted RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 POLR2IP36954 125 aaKnown RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 IGFBP7Q16270 282 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 PGGHGQ32M88 737 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 CCDC183Q5T5S1 534 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 MRPL55Q7Z7F7 128 aaKnown RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 FAM71AQ8IYT1 594 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 ST20-AS1Q8NBB2 130 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 TTLQ8NG68 377 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 OR13G1Q8NGZ3 307 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 OR5K2Q8NHB8 316 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 RTN4IP1Q8WWV3 396 aaPredicted RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 DCPSQ96C86 337 aaKnown RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 NRBF2Q96F24 287 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 C18orf15Q96N68 181 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 TGS1Q96RS0 853 aaKnown RBP2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 SULT4A1Q9BR01 284 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 C1orf198Q9H425 327 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 AGPAT4Q9NRZ5 378 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 NINLQ9Y2I6 1382 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 FHOD3Q2V2M9 1422 aa2.08□□□□□ -2.08
CDC42SE2-204ENST00000502639 TRAV19A0A0A6YYK7 116 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 LSM1O15116 133 aaKnown RBP2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 ERLIN1O75477 346 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 SLC22A5O76082 557 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 GLSO94925 669 aaPredicted RBP2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 CD37P11049 281 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 RBM34P42696 430 aaKnown RBP2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 CCNG1P51959 295 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 IFT88Q13099 833 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 SLC39A6Q13433 755 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 IDI1Q13907 227 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 PIGHQ14442 188 aaPredicted RBP2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 NCF4Q15080 339 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 RBMY1FQ15415 496 aaKnown RBP2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 PSMD5Q16401 504 aa2.07□□□□□ -2.08
CDC42SE2-204ENST00000502639 HSDL1Q3SXM5 330 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms