RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, human

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-210	ENST00000496840	EIF2S2	P20042	333 aa	Known RBP	2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	RPS5	P46782	204 aa	Known RBP	2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	ATP5O	P48047	213 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	PPP1CB	P62140	327 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	IRF8	Q02556	426 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	CDH17	Q12864	832 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	QPRT	Q15274	297 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	IRF4	Q15306	451 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	PSMD5	Q16401	504 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	TTC23L	Q6PF05	361 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	SSX9	Q7RTT3	188 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	ZNF547	Q8IVP9	402 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	TTC29	Q8NA56	475 aa	Predicted RBP	2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	C11orf72	Q8NBR9	251 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	OR52E2	Q8NGJ4	325 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	OR52E5	Q8NH55	327 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	LRRC29	Q8WV35	223 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	NTAN1	Q96AB6	310 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	MRPS30	Q9NP92	439 aa	Known RBP	2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	ACP6	Q9NPH0	428 aa		2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	C20orf96	Q9NUD7	363 aa	Predicted RBP	2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	TSSC4	Q9Y5U2	329 aa	Predicted RBP	2.72	□□□□□ -1.97
TARDBP-210	ENST00000496840	KCNE1B	A0A087WTH5	132 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840		A0A0U1RQV1	116 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840		H7C417	338 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	SLC9A3R1	O14745	358 aa	Predicted RBP	2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	RBFOX2	O43251	390 aa	Known RBP eCLIP	2.71	□□□□□ -1.98	9e-6	■□□□□ 10.7
TARDBP-210	ENST00000496840	ZNF207	O43670	478 aa	Known RBP	2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	LINC00869	P0C866	280 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	TCN2	P20062	427 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	WARS	P23381	471 aa	Known RBP	2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	U2AF2	P26368	475 aa	Known RBP eCLIP	2.71	□□□□□ -1.98	8e-15	■□□□□ 10.4
TARDBP-210	ENST00000496840	SEMG2	Q02383	582 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	TWF2	Q6IBS0	349 aa	Known RBP	2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	PRMT9	Q6P2P2	845 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	CLEC2A	Q6UVW9	174 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	SPESP1	Q6UW49	350 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	NPSR1	Q6W5P4	371 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	MBOAT2	Q6ZWT7	520 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	OR56A4	Q8NGH8	313 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	PIFO	Q8TCI5	191 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	MTG1	Q9BT17	334 aa	Predicted RBP	2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	ELOVL6	Q9H5J4	265 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	MTFP1	Q9UDX5	166 aa		2.71	□□□□□ -1.98
TARDBP-210	ENST00000496840	FBN1	P35555	2871 aa	Known RBP	2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	TRAV25	A0A0B4J276	109 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	TMEM223	A0PJW6	202 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	RDH16	O75452	317 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	ASGR1	P07306	291 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	CSNK2A2	P19784	350 aa	Predicted RBP	2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	HMOX2	P30519	316 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	SSTR5	P35346	364 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	ORMDL2	Q53FV1	153 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	METTL13	Q8N6R0	699 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	CHST4	Q8NCG5	386 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	APH1B	Q8WW43	257 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	ZNF317	Q96PQ6	595 aa	Predicted RBP	2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	ZYG11B	Q9C0D3	744 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	WFDC1	Q9HC57	220 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	LYRM4	Q9HD34	91 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	HMG20A	Q9NP66	347 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	CCNB1IP1	Q9NPC3	277 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	FAM49B	Q9NUQ9	324 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	CTSF	Q9UBX1	484 aa		2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	RCL1	Q9Y2P8	373 aa	Known RBP	2.7	□□□□□ -1.98
TARDBP-210	ENST00000496840	UBN2	Q6ZU65	1347 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	TNS2	Q63HR2	1409 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	IGKV1-8	A0A0C4DH67	115 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840		H7C1H1	209 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	DNASE2	O00115	360 aa	Predicted RBP	2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	RAD51B	O15315	384 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	NVL	O15381	856 aa	Known RBP	2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	SOCS1	O15524	211 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	CCNB2	O95067	398 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	IGKV1D-16	P01601	117 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	HBE1	P02100	147 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	CTSL	P07711	333 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	ERG	P11308	486 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	RAB3A	P20336	220 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	GSTM3	P21266	225 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	NBL1	P41271	181 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	KIR3DL2	P43630	455 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	HCAR3	P49019	387 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	KRTAP12-3	P60328	96 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	UBE2M	P61081	183 aa	Known RBP	2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	UBE2N	P61088	152 aa	Known RBP	2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	MEF2B	Q02080	365 aa	Predicted RBP	2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	IL18	Q14116	193 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	IGFBP7	Q16270	282 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	FAM78A	Q5JUQ0	283 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	ZNF684	Q5T5D7	378 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	AVPI1	Q5T686	147 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	C12orf54	Q6X4T0	127 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	BRD3OS	Q6XYD6	125 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	PRSS58	Q8IYP2	241 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	KATNAL2	Q8IYT4	538 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	OSR2	Q8N2R0	312 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	LINC00304	Q8N9R0	145 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	BPIFC	Q8NFQ6	507 aa		2.69	□□□□□ -1.98
TARDBP-210	ENST00000496840	OR6N1	Q8NGY5	312 aa		2.69	□□□□□ -1.98

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