RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	STYXL1	Q9Y6J8	313 aa		4.01	□□□□□ -1.77
CCDC66-222	ENST00000494672	PLXNC1	O60486	1568 aa		4.01	□□□□□ -1.77
CCDC66-222	ENST00000494672	MTCL1	Q9Y4B5	1905 aa	Known RBP	4.01	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUOX2	Q9NRD8	1548 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ASTN1	O14525	1302 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672		A0A1B0GW55	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CIB4	A0PJX0	185 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	OR6C6	A6NF89	314 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672		A8MWP6	167 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	IFNL4	K9M1U5	179 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CTDSPL	O15194	276 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	GYG2	O15488	501 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CDC40	O60508	579 aa	Known RBP eCLIP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TPST2	O60704	377 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	PAGE4	O60829	102 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	UPK1B	O75841	260 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SC5D	O75845	299 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CEACAM4	O75871	244 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SNAPC5	O75971	98 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ATG12	O94817	140 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	KCNK2	O95069	426 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4L2	P0CJ85	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4L3	P0CJ86	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4L4	P0CJ87	422 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4L5	P0CJ88	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4L6	P0CJ89	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4L7	P0CJ90	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	MYL2	P10916	166 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	HLA-E	P13747	358 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	IVD	P26440	423 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	AK4	P27144	223 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	S100A2	P29034	98 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	RGR	P47804	291 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	GNB1	P62873	340 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	BTN3A2	P78410	334 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	GNA12	Q03113	381 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	FGFBP1	Q14512	234 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	QPRT	Q15274	297 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DGUOK	Q16854	277 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	PLPPR5	Q32ZL2	321 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	C6orf226	Q5I0X4	101 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CBWD3	Q5JTY5	395 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	NCMAP	Q5T1S8	102 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	OGFRL1	Q5TC84	451 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SDHAF4	Q5VUM1	108 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SLC22A10	Q63ZE4	541 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	STEAP4	Q687X5	459 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TMEM42	Q69YG0	159 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TMEM225	Q6GV28	225 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ZNF770	Q6IQ21	691 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	KRTAP5-1	Q6L8H4	278 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CBLN3	Q6UW01	205 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	FAM198B	Q6UWH4	519 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TEX261	Q6UWH6	196 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ZNF497	Q6ZNH5	498 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SLC36A1	Q7Z2H8	476 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TRPT1	Q86TN4	253 aa	Known RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	PTOV1	Q86YD1	416 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	KLHDC8A	Q8IYD2	350 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CPNE9	Q8IYJ1	553 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ZNF738	Q8NE65	137 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ACVR1C	Q8NER5	493 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	OR4Q3	Q8NH05	313 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	OR10A6	Q8NH74	314 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	OR5K1	Q8NHB7	308 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	LGALS14	Q8TCE9	139 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TBCK	Q8TEA7	893 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ORAOV1	Q8WV07	137 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CYGB	Q8WWM9	190 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SUSD6	Q92537	303 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	RPL3L	Q92901	407 aa	Known RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	NAT6	Q93015	286 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	IGSF8	Q969P0	613 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	RERG	Q96A58	199 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	RPUSD4	Q96CM3	377 aa	Known RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TLCD1	Q96CP7	247 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	MOCOS	Q96EN8	888 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	MMAB	Q96EY8	250 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CDKN2AIPNL	Q96HQ2	116 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	HYLS1	Q96M11	299 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	GPR137	Q96N19	417 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SORT1	Q99523	831 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ARHGDIG	Q99819	225 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	SLC6A7	Q99884	636 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	APOL4	Q9BPW4	351 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	CMSS1	Q9BQ75	279 aa	Known RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	ATG101	Q9BSB4	218 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	RIOK2	Q9BVS4	552 aa	Known RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	PLK3	Q9H4B4	646 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	EGLN3	Q9H6Z9	239 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	UBE2Z	Q9H832	354 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	LMAN1L	Q9HAT1	526 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	LHX9	Q9NQ69	397 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	FGF21	Q9NSA1	209 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	NLE1	Q9NVX2	485 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672	DUX4	Q9UBX2	424 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	NEU3	Q9UQ49	428 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	TNN	Q9UQP3	1299 aa		4	□□□□□ -1.77
CCDC66-222	ENST00000494672	FOXA2	Q9Y261	457 aa	Predicted RBP	4	□□□□□ -1.77
CCDC66-222	ENST00000494672		U3KQ87	197 aa		4	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms