RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ZIM3Q96PE6 472 aa4.17□□□□□ -1.74
SMC2-205ENST00000493955 OR2AG1Q9H205 316 aa4.17□□□□□ -1.74
SMC2-205ENST00000493955 LINC00597Q9H2U6 94 aa4.17□□□□□ -1.74
SMC2-205ENST00000493955 DYRK4Q9NR20 520 aa4.17□□□□□ -1.74
SMC2-205ENST00000493955 ADGRB3O60242 1522 aa4.17□□□□□ -1.74
SMC2-205ENST00000493955 PTPN23Q9H3S7 1636 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 SHPRHQ149N8 1683 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 LRRC9Q6ZRR7 1453 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 A0A1B0GUA9 196 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 NCBP2LA6PVI3 153 aaKnown RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 CHMP2AO43633 222 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 HSBP1O75506 76 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 FARS2O95363 451 aaKnown RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 FABP3P05413 133 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 RAB3BP20337 219 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 OMGP23515 440 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 RFC3P40938 356 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 CXCL5P42830 114 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 GPR1P46091 355 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 THEM4Q5T1C6 240 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 GPR107Q5VW38 600 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 MBOAT2Q6ZWT7 520 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 MRPL21Q7Z2W9 205 aaKnown RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 CBLN2Q8IUK8 224 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 C11orf53Q8IXP5 236 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 PIH1D2Q8WWB5 315 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 APH1AQ96BI3 265 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 RNF185Q96GF1 192 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 HDHD3Q9BSH5 251 aaPredicted RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 CDC42EP4Q9H3Q1 356 aaKnown RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 MRM3Q9HC36 420 aaKnown RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 CACNG2Q9Y698 323 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.16□□□□□ -1.74
SMC2-205ENST00000493955 DIP2AQ14689 1571 aa4.16□□□□□ -1.74
SMC2-205ENST00000493955 LTBP1Q14766 1721 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 ARHGAP21Q5T5U3 1957 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 EFCAB6Q5THR3 1501 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 DUOX2Q9NRD8 1548 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 A0A0J9YYE9 177 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 A0A1B0GUH1 482 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 A0A1W2PPV4 95 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 NKX2-6A6NCS4 301 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 TRBC1P01850 177 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 MBP02144 154 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 RETP07949 1114 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 NR2C1P13056 603 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 CSNK2A2P19784 350 aaPredicted RBP4.15□□□□□ -1.74
SMC2-205ENST00000493955 RAB4AP20338 218 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 CYB561P49447 251 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 CRISP3P54108 245 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 QPRTQ15274 297 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 GABRA6Q16445 453 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 HSP90AA4PQ58FG1 418 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 PIGGQ5H8A4 983 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 ZNF429Q86V71 674 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 RNF175Q8N4F7 328 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 OR52E2Q8NGJ4 325 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 TMEM158Q8WZ71 300 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 SEH1LQ96EE3 360 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 FAM210BQ96KR6 192 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 WFIKKN1Q96NZ8 548 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 FOXC2Q99958 501 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 RPS6KB2Q9UBS0 482 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 DDX19BQ9UMR2 479 aa4.15□□□□□ -1.74
SMC2-205ENST00000493955 TMEM94Q12767 1356 aa4.15□□□□□ -1.75
SMC2-205ENST00000493955 IGLV1-36A0A0B4J1U3 117 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 IGHV3-64DA0A0J9YX35 117 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 A6NDN8 102 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 FAM25EA8MYX2 175 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 PLPP1O14494 284 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 XRCC2O43543 280 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 SS18L1O75177 396 aaPredicted RBP4.14□□□□□ -1.75
SMC2-205ENST00000493955 CSTAP01040 98 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 STAG3L2P0CL84 134 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 PMCHP20382 165 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 WARSP23381 471 aaKnown RBP4.14□□□□□ -1.75
SMC2-205ENST00000493955 CEACAM3P40198 252 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 CDKN2BP42772 138 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 ZNF138P52744 262 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 PSMD4P55036 377 aaKnown RBP4.14□□□□□ -1.75
SMC2-205ENST00000493955 SEMG2Q02383 582 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 POU2AF1Q16633 256 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 NPSR1Q6W5P4 371 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 MRPL55Q7Z7F7 128 aaKnown RBP4.14□□□□□ -1.75
SMC2-205ENST00000493955 OR51F2Q8NH61 342 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 OR51E1Q8TCB6 317 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 TOP1MTQ969P6 601 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 PARP12Q9H0J9 701 aaKnown RBP4.14□□□□□ -1.75
SMC2-205ENST00000493955 DEFB129Q9H1M3 183 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 TMEM131LA2VDJ0 1609 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 NRXN3Q9Y4C0 1643 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 E9PCH4 1651 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 FAM135BQ49AJ0 1406 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 NKTRP30414 1462 aaKnown RBP4.14□□□□□ -1.75
SMC2-205ENST00000493955 LMTK2Q8IWU2 1503 aa4.14□□□□□ -1.75
SMC2-205ENST00000493955 NHSL1Q5SYE7 1610 aa4.13□□□□□ -1.75
SMC2-205ENST00000493955 AHDC1Q5TGY3 1603 aaPredicted RBP4.13□□□□□ -1.75
SMC2-205ENST00000493955 TRAV6A0A075B6T7 132 aa4.13□□□□□ -1.75
SMC2-205ENST00000493955 PANO1I0J062 215 aa4.13□□□□□ -1.75
SMC2-205ENST00000493955 CD5LO43866 347 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms