RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 ARF1P84077 181 aaKnown RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 PMPCAQ10713 525 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 FAPQ12884 760 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 RAB39AQ14964 217 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SPHARQ15513 63 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 TSC22D1Q15714 1073 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 STK11Q15831 433 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SSX1Q16384 188 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SGCAQ16586 387 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 RSPO1Q2MKA7 263 aaPredicted RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 TP53I3Q53FA7 332 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 HIST2H3PS2Q5TEC6 136 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 FAM27BQ5VT28 67 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 C9orf135Q5VTT2 229 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 FBXW9Q5XUX1 488 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 OR2A2Q6IF42 318 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 CFAP161Q6P656 301 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF474Q6S9Z5 364 aaPredicted RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 KLHL24Q6TFL4 600 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 PLEKHG7Q6ZR37 379 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 HIST2H3AQ71DI3 136 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF627Q7L945 461 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SKA3Q8IX90 412 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 GABRG1Q8N1C3 465 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 GPR137CQ8N3F9 429 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 LRRC18Q8N456 261 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 CNEP1R1Q8N9A8 125 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF610Q8N9Z0 462 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 NUDT10Q8NFP7 164 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 OR13F1Q8NGS4 319 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 OR6K3Q8NGY3 331 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 OR52N1Q8NH53 320 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 RPS4Y2Q8TD47 263 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SPRYD4Q8WW59 207 aaPredicted RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 HSD17B8Q92506 261 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 YIPF6Q96EC8 236 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 FBXO17Q96EF6 278 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 PELI1Q96FA3 418 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 NUDT11Q96G61 164 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 COG8Q96MW5 612 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 OPALINQ96PE5 141 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 FOXB1Q99853 325 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SH3GL3Q99963 347 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 ABHD6Q9BV23 337 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 YIPF3Q9GZM5 350 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 NAA50Q9GZZ1 169 aaKnown RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 RBM38Q9H0Z9 239 aaKnown RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 OPN3Q9H1Y3 402 aaPredicted RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 TP63Q9H3D4 680 aaPredicted RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SEC61A2Q9H9S3 476 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SIAEQ9HAT2 523 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 NOX3Q9HBY0 568 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 PLSCR4Q9NRQ2 329 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 INPP5EQ9NRR6 644 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 PARPBPQ9NWS1 579 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SLCO1C1Q9NYB5 712 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 Q9UFV3 132 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 MRM2Q9UI43 246 aaKnown RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SH3BGRL2Q9UJC5 107 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 CAB39Q9Y376 341 aaPredicted RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 EXOSC1Q9Y3B2 195 aaKnown RBP4.24□□□□□ -1.73
EPCAM-206ENST00000490733 GRIP1Q9Y3R0 1128 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 SNX5Q9Y5X3 404 aa4.24□□□□□ -1.73
EPCAM-206ENST00000490733 FAM208BQ5VWN6 2430 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 NBPF19A0A087WUL8 3843 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 C5orf63A6NC05 138 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 OR6C65A6NJZ3 312 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF587BE7ETH6 402 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 E9PLN8 166 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF670-ZNF695F2Z2N8 137 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 H3BSA7 217 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 SRSF10O75494 262 aaKnown RBP4.23□□□□□ -1.73
EPCAM-206ENST00000490733 C1QL1O75973 258 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 PRB1P04280 392 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 AMY2AP04746 511 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 OR8G3PP0DMU2 310 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 NR2C1P13056 603 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF823P16415 610 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 MYL12AP19105 171 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 AMY2BP19961 511 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 NPR2P20594 1047 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 MSR1P21757 451 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 CTSSP25774 331 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 PSMB9P28065 219 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 MPGP29372 298 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 PSMB10P40306 273 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 OPRL1P41146 370 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 CA7P43166 264 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 ZNF84P51523 738 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 WNT4P56705 351 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 NANOS3P60323 173 aaKnown RBP4.23□□□□□ -1.73
EPCAM-206ENST00000490733 TUBA1BP68363 451 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 PSG4Q00888 419 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 ROM1Q03395 351 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 ACSM1Q08AH1 577 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 MLLT11Q13015 90 aaPredicted RBP4.23□□□□□ -1.73
EPCAM-206ENST00000490733 EIF2B1Q14232 305 aaKnown RBP4.23□□□□□ -1.73
EPCAM-206ENST00000490733 SF3B4Q15427 424 aaKnown RBP eCLIP4.23□□□□□ -1.732e-8■■■■■ 37
EPCAM-206ENST00000490733 CDSNQ15517 529 aa4.23□□□□□ -1.73
EPCAM-206ENST00000490733 MED22Q15528 200 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms