RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 COMMD4Q9H0A8 199 aa9.52□□□□□ -0.89
VARS2-210ENST00000490699 OR10A2Q9H208 303 aa9.52□□□□□ -0.89
VARS2-210ENST00000490699 SLCO1C1Q9NYB5 712 aa9.52□□□□□ -0.89
VARS2-210ENST00000490699 KLHDC2Q9Y2U9 406 aa9.52□□□□□ -0.89
VARS2-210ENST00000490699 IGHV1-18A0A0C4DH31 117 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 TBX1O43435 398 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 IGLV1-44P01699 117 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 LCATP04180 440 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 LIMS3P0CW19 117 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 LIMS4P0CW20 117 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 HSMCR30P0CW71 290 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 COX6B1P14854 86 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 CRYGSP22914 178 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 TUBG1P23258 451 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 CFL1P23528 166 aaKnown RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 CD40P25942 277 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 OR12D2P58182 307 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 SELENOVP59797 346 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 NAAAQ02083 359 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 SPHARQ15513 63 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 CDSNQ15517 529 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 TIGD6Q17RP2 521 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 CCDC58Q4VC31 144 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 LIPNQ5VXI9 398 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 SLC22A25Q6T423 547 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 SEZ6L2Q6UXD5 910 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 DMRTC2Q8IXT2 367 aaPredicted RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 NANOGP1Q8N7R0 232 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 CPEB3Q8NE35 698 aaKnown RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 SPRYD4Q8WW59 207 aaPredicted RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 RORBQ92753 470 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 APOBEC3DQ96AK3 386 aaPredicted RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 C4orf45Q96LM5 186 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 MRPS26Q9BYN8 205 aaKnown RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 OPA3Q9H6K4 179 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 NOX3Q9HBY0 568 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 BRD7Q9NPI1 651 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 PNRC2Q9NPJ4 139 aaKnown RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 TUBG2Q9NRH3 451 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 PAK1IP1Q9NWT1 392 aaPredicted RBP9.51□□□□□ -0.89
VARS2-210ENST00000490699 BABAM2Q9NXR7 383 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 SCOCQ9UIL1 159 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 ZNF391Q9UJN7 358 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 N6AMT1Q9Y5N5 214 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 R4GMQ9 66 aa9.51□□□□□ -0.89
VARS2-210ENST00000490699 HCFC1P51610 2035 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 CACNA1CQ13936 2221 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ZNF503-AS2A6NEH8 195 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ABCD4O14678 606 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 XRCC2O43543 280 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ATE1O95260 518 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 UBCP0CG48 685 aaKnown RBP9.5□□□□□ -0.89
VARS2-210ENST00000490699 PSKH1P11801 424 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ATP6V1B1P15313 513 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 PCSK6P29122 969 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 CDH15P55291 814 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ZNF121P58317 390 aaPredicted RBP9.5□□□□□ -0.89
VARS2-210ENST00000490699 BDH1Q02338 343 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 BSPH1Q075Z2 132 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ZNF704Q6ZNC4 412 aaPredicted RBP9.5□□□□□ -0.89
VARS2-210ENST00000490699 FAM57BQ71RH2 274 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 SSX6Q7RTT6 188 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 KLBQ86Z14 1044 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 RFLNBQ8N5W9 214 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 OR10S1Q8NGN2 331 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ABHD4Q8TB40 342 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 GATAD2BQ8WXI9 593 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 AKAP1Q92667 903 aaKnown RBP eCLIP9.5□□□□□ -0.89
VARS2-210ENST00000490699 UFD1Q92890 307 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 PLPPR2Q96GM1 343 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 POM121L2Q96KW2 1035 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 AMELYQ99218 206 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 SPOCK3Q9BQ16 436 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 RGCCQ9H4X1 137 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 ACOXLQ9NUZ1 547 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 TBCCD1Q9NVR7 557 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 CRIM1Q9NZV1 1036 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 KCNN3Q9UGI6 736 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 CLEC2DQ9UHP7 191 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 MRM2Q9UI43 246 aaKnown RBP9.5□□□□□ -0.89
VARS2-210ENST00000490699 RNF115Q9Y4L5 304 aa9.5□□□□□ -0.89
VARS2-210ENST00000490699 IGHV2OR16-5A0A0B4J2B6 119 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 TRBV2A0A0J9YWF9 115 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 A1L4Q6 167 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 TMEM212A6NML5 194 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 MTRF1O75570 445 aaKnown RBP9.49□□□□□ -0.89
VARS2-210ENST00000490699 CLPTM1O96005 669 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 LCKP06239 509 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 THBDP07204 575 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 CELA3BP08861 270 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 ACSM4P0C7M7 580 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 CCL2P13500 99 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 ZNF12P17014 697 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 PSMB9P28065 219 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 GCH1P30793 250 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 OTX1P32242 354 aaPredicted RBP9.49□□□□□ -0.89
VARS2-210ENST00000490699 TGM4P49221 684 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 MMP16P51512 607 aa9.49□□□□□ -0.89
VARS2-210ENST00000490699 SNTB1Q13884 538 aaKnown RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms