RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 SYNGR3O43761 229 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 RPP14O95059 124 aaKnown RBP12.36□□□□□ -0.43
CLDN11-209ENST00000489485 IGLV1-44P01699 117 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 CECR9P0C854 216 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 HSMCR30P0CW71 290 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 APLNRP35414 380 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 GALK2Q01415 458 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ROM1Q03395 351 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 SPHARQ15513 63 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF684Q5T5D7 378 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.36□□□□□ -0.43
CLDN11-209ENST00000489485 FAM169BQ8N8A8 192 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 YIPF7Q8N8F6 280 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 OR1F12Q8NHA8 337 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 FAM222BQ8WU58 562 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 SLC7A6Q92536 515 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 MRPL48Q96GC5 212 aaKnown RBP12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ATF6BQ99941 703 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ESRP2Q9H6T0 727 aaKnown RBP12.36□□□□□ -0.43
CLDN11-209ENST00000489485 LSM2Q9Y333 95 aaKnown RBP12.36□□□□□ -0.43
CLDN11-209ENST00000489485 LRP12Q9Y561 859 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 C5orf49A4QMS7 147 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 METTL15A6NJ78 407 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF878C9JN71 531 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 SULT1C4O75897 302 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 INMTO95050 263 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 MT-ND5P03915 603 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 H2BFMP0C1H6 154 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 CRYGSP22914 178 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 OPRL1P41146 370 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 BSPH1Q075Z2 132 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 LIPNQ5VXI9 398 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 KLBQ86Z14 1044 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 SYS1Q8N2H4 156 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 PIAS4Q8N2W9 510 aaPredicted RBP12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF485Q8NCK3 441 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 OR52N1Q8NH53 320 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 RORBQ92753 470 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 SPOCK3Q9BQ16 436 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 PTPN13Q12923 2485 aa12.36□□□□□ -0.43
CLDN11-209ENST00000489485 ROS1P08922 2347 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 CENPEQ02224 2701 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 LOC100509620A0A075B734 347 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-209ENST00000489485 OR6C6A6NF89 314 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 DPRXA6NFQ7 191 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 CCDC160A6NGH7 325 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 F5H5K5 113 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 LALBAP00709 142 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 CRYAAP02489 173 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 DBHP09172 617 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 TACSTD2P09758 323 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 PTAFRP25105 342 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 CD40P25942 277 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 COL8A1P27658 744 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 PSMB10P40306 273 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 GDI2P50395 445 aaKnown RBP12.35□□□□□ -0.43
CLDN11-209ENST00000489485 TBC1D28Q2M2D7 210 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 RHOUQ7L0Q8 258 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 FAM220AQ7Z4H9 259 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 KCTD20Q7Z5Y7 419 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 ACBD4Q8NC06 268 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 PELI1Q96FA3 418 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 KCNS3Q9BQ31 491 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 BABAM2Q9NXR7 383 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 GRIP1Q9Y3R0 1128 aa12.35□□□□□ -0.43
CLDN11-209ENST00000489485 E9PI62 339 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 ABCD4O14678 606 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 ABHD16AO95870 558 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 COX5BP10606 129 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 COX6B1P14854 86 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 PSMB9P28065 219 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 HSD11B1P28845 292 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 RIDAP52758 137 aaKnown RBP12.34□□□□□ -0.43
CLDN11-209ENST00000489485 NAAAQ02083 359 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 ECH1Q13011 328 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 C3orf36Q3SXR2 165 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 BEX5Q5H9J7 111 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 UBE2UQ5VVX9 321 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 DEGS2Q6QHC5 323 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 PIK3IP1Q96FE7 263 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 RADILQ96JH8 1075 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 POM121L2Q96KW2 1035 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 MGLLQ99685 303 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 COQ7Q99807 217 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 CDH20Q9HBT6 801 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 DDX28Q9NUL7 540 aaKnown RBP12.34□□□□□ -0.43
CLDN11-209ENST00000489485 PLEKHB1Q9UF11 243 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-209ENST00000489485 PNMA8CA0A1B0GUJ8 204 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF254O75437 659 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 PRKXP51817 358 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 TIGD6Q17RP2 521 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 RSPO1Q2MKA7 263 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-209ENST00000489485 NCMAPQ5T1S8 102 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 ZNF367Q7RTV3 350 aa12.34□□□□□ -0.43
CLDN11-209ENST00000489485 PAQR4Q8N4S7 273 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-209ENST00000489485 ZFP41Q8N8Y5 198 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms