RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ACOT12Q8WYK0 555 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 CEP19Q96LK0 163 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 SLCO5A1Q9H2Y9 848 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 CRLF2Q9HC73 371 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 PNRC2Q9NPJ4 139 aaKnown RBP11.18□□□□□ -0.62
NELFE-209ENST00000488426 PLSCR2Q9NRY7 297 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 DDX28Q9NUL7 540 aaKnown RBP11.18□□□□□ -0.62
NELFE-209ENST00000488426 TMEM38BQ9NVV0 291 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 OR52A1Q9UKL2 312 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 EMC9Q9Y3B6 208 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 CMAHPQ9Y471 501 aa11.18□□□□□ -0.62
NELFE-209ENST00000488426 PHF3Q92576 2039 aaKnown RBP11.17□□□□□ -0.62
NELFE-209ENST00000488426 TRBV5-7A0A0A0MS05 114 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SMIM30A4D0T7 59 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ACOD1A6NK06 481 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 PDCD5O14737 125 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 RGS5O15539 181 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ISG15P05161 165 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 YES1P07947 543 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 RAB3BP20337 219 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 HSD11B1P28845 292 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CD40LGP29965 261 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CAV3P56539 151 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 PSMA6P60900 246 aaKnown RBP11.17□□□□□ -0.62
NELFE-209ENST00000488426 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
NELFE-209ENST00000488426 NRN1LQ496H8 165 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SPANXN2Q5MJ10 180 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 MZT2AQ6P582 158 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CCDC190Q86UF4 302 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ST6GALNAC3Q8NDV1 305 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ALKBH3Q96Q83 286 aaPredicted RBP11.17□□□□□ -0.62
NELFE-209ENST00000488426 ATF6BQ99941 703 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 GPR35Q9HC97 309 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 G6PC2Q9NQR9 355 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 FAM206AQ9NX38 181 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 GTF2A1LQ9UNN4 478 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SLC22A13Q9Y226 551 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 WIPF3A6NGB9 483 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ANKRD61A6NGH8 418 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SLC22A20A6NK97 555 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 J3QRK9 145 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 RER1O15258 196 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 PIN1P1O15428 100 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 MAGEB3O15480 346 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 TMEM127O75204 238 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 NCR1O76036 304 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CST2P09228 141 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 UBCP0CG48 685 aaKnown RBP11.17□□□□□ -0.62
NELFE-209ENST00000488426 SRMP19623 302 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ACHEP22303 614 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CTSSP25774 331 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 PPP5CP53041 499 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 PPP3R1P63098 170 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 TAF13Q15543 124 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 BCL2L15Q5TBC7 163 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 NR2C2APQ86WQ0 139 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SIAH3Q8IW03 269 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SSC4DQ8WTU2 575 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 HTRA1Q92743 480 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 SARAFQ96BY9 339 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 ZNF837Q96EG3 531 aaPredicted RBP11.17□□□□□ -0.62
NELFE-209ENST00000488426 SLITRK2Q9H156 845 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CSMD1Q96PZ7 3565 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 CACNA1DQ01668 2161 aa11.17□□□□□ -0.62
NELFE-209ENST00000488426 UNC79Q9P2D8 2635 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 ITPR2Q14571 2701 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 A0A0G2JK05 382 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 A0A1W2PPK0 400 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 NOTOA8MTQ0 251 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 RPL36A-HNRNPH2H7BZ11 118 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 KRT33AO76009 404 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 CLDN1O95832 211 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 TNFSF8P32971 234 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 CEACAM16Q2WEN9 425 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 TSPO2Q5TGU0 170 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 TMEM244Q5VVB8 128 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 C16orf87Q6PH81 154 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 LINGO2Q7L985 606 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 ADGRE4PQ86SQ3 457 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 LAX1Q8IWV1 398 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 FOXB1Q99853 325 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 SLC30A2Q9BRI3 323 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 WACQ9BTA9 647 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 ZCCHC4Q9H5U6 513 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 GLRX2Q9NS18 164 aa11.16□□□□□ -0.62
NELFE-209ENST00000488426 NUFIP1Q9UHK0 495 aaKnown RBP11.16□□□□□ -0.62
NELFE-209ENST00000488426 EDN3P14138 238 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 SOX2P48431 317 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 OR10A3P58181 314 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 SYT9Q86SS6 491 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 ELMOD2Q8IZ81 293 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 RDH10Q8IZV5 341 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 OR10AC1Q8NH08 325 aa11.15□□□□□ -0.62
NELFE-209ENST00000488426 TSEN15Q8WW01 171 aaKnown RBP11.15□□□□□ -0.62
NELFE-209ENST00000488426 TMEM106AQ96A25 262 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms