RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 B3GNT7Q8NFL0 401 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 OR10AD1Q8NGE0 317 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 N4BP2L2Q92802 583 aaPredicted RBP0.97□□□□□ -2.25
SMC4-219ENST00000487747 C18orf15Q96N68 181 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 ZBTB18Q99592 522 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 NT5C3AQ9H0P0 336 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 LRRC40Q9H9A6 602 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 PARP11Q9NR21 331 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 NUP50Q9UKX7 468 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 GOLT1BQ9Y3E0 138 aa0.97□□□□□ -2.25
SMC4-219ENST00000487747 PALLDQ8WX93 1383 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 ARHGEF35A5YM69 484 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 LRRIQ3A6PVS8 624 aaPredicted RBP0.96□□□□□ -2.26
SMC4-219ENST00000487747 MANBAO00462 879 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 PPP1R2P9O14990 202 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 CLIC3O95833 236 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 CRYGBP07316 175 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 ARL14EPLP0DKL9 152 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 ATF6P18850 670 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 FOXN2P32314 431 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 IDH2P48735 452 aaKnown RBP0.96□□□□□ -2.26
SMC4-219ENST00000487747 GFERP55789 205 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 BST1Q10588 318 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 TGFBIQ15582 683 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 KRTAP21-3Q3LHN1 58 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 ANKDD1AQ495B1 522 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 UBE2UQ5VVX9 321 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 H3F3CQ6NXT2 135 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 USP50Q70EL3 339 aaPredicted RBP0.96□□□□□ -2.26
SMC4-219ENST00000487747 NT5DC3Q86UY8 548 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 ZFP41Q8N8Y5 198 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 C11orf72Q8NBR9 251 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 SPATA4Q8NEY3 305 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 ZBED3Q96IU2 234 aaPredicted RBP0.96□□□□□ -2.26
SMC4-219ENST00000487747 ILKAPQ9H0C8 392 aaPredicted RBP0.96□□□□□ -2.26
SMC4-219ENST00000487747 HYPKQ9NX55 129 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 EXTL2Q9UBQ6 330 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 STARD10Q9Y365 291 aa0.96□□□□□ -2.26
SMC4-219ENST00000487747 CSDC2Q9Y534 153 aaKnown RBP0.96□□□□□ -2.26
SMC4-219ENST00000487747 ADGRA3Q8IWK6 1321 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 IGKV1-8A0A0C4DH67 115 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 OR6C74A6NCV1 312 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 MFNGO00587 321 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 NUPL2O15504 423 aaKnown RBP0.95□□□□□ -2.26
SMC4-219ENST00000487747 KLHL41O60662 606 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 SLC22A5O76082 557 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 AQP8O94778 261 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 GLSO94925 669 aaPredicted RBP0.95□□□□□ -2.26
SMC4-219ENST00000487747 IGHV3-11P01762 117 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 IGKV1-16P04430 117 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 PSMB5P28074 263 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 HNRNPH3P31942 346 aaKnown RBP0.95□□□□□ -2.26
SMC4-219ENST00000487747 HCAR3P49019 387 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 CSNK1EP49674 416 aaKnown RBP0.95□□□□□ -2.26
SMC4-219ENST00000487747 P2RX1P51575 399 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 CDH6P55285 790 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 TBPL2Q6SJ96 375 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 CASC1Q6TDU7 716 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 COX18Q8N8Q8 333 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 ZNF502Q8TBZ5 544 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 DCPSQ96C86 337 aaKnown RBP0.95□□□□□ -2.26
SMC4-219ENST00000487747 HSD17B10Q99714 261 aaKnown RBP0.95□□□□□ -2.26
SMC4-219ENST00000487747 ATP5SQ99766 215 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 SEC22CQ9BRL7 303 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 GGTLC1Q9BX51 225 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 LINC00574Q9H8X3 128 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 EDA2RQ9HAV5 297 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 LOXHD1Q8IVV2 1947 aa0.95□□□□□ -2.26
SMC4-219ENST00000487747 KRBOX1C9JBD0 128 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 L7N2F9 121 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 SEMA3DO95025 777 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 SERPINA5P05154 406 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CT45A6P0DMU7 189 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CT45A5P0DMU8 189 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CT45A7P0DMV0 189 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 SLC2A3P11169 496 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 IFI30P13284 250 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 NTF3P20783 257 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 NAA10P41227 235 aaPredicted RBP0.94□□□□□ -2.26
SMC4-219ENST00000487747 TMED10P49755 219 aaKnown RBP0.94□□□□□ -2.26
SMC4-219ENST00000487747 MAD2L1BPQ15013 274 aaPredicted RBP0.94□□□□□ -2.26
SMC4-219ENST00000487747 VPS26BQ4G0F5 336 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 PYDC2Q56P42 97 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 TCEAL5Q5H9L2 206 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CT45A1Q5HYN5 189 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 SOHLH1Q5JUK2 328 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 TEX30Q5JUR7 227 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 PRAMEF5Q5TYX0 476 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 PRAMEF6Q5VXH4 476 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 TMEM150AQ86TG1 271 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CDR2LQ86X02 465 aaPredicted RBP0.94□□□□□ -2.26
SMC4-219ENST00000487747 PRELID2Q8N945 189 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CT45A3Q8NHU0 189 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 SLC7A13Q8TCU3 470 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 RSPH1Q8WYR4 309 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 TCEAL3Q969E4 200 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 CCDC126Q96EE4 140 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 RSG1Q9BU20 258 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 ANKRD60Q9BZ19 345 aa0.94□□□□□ -2.26
SMC4-219ENST00000487747 OR51M1Q9H341 326 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms