RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MYOZ1Q9NP98 299 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P36-201ENST00000487709 A0A1B0GW55 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 LRCOL1A6NCL2 159 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR2AG2A6NM03 316 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 PDZK1P1A8MUH7 402 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 EIF3HO15372 352 aaKnown RBP eCLIP2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 CACNG3O60359 315 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 RCBTB2O95199 551 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 HLA-DQA1P01909 254 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DUX4L2P0CJ85 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DUX4L3P0CJ86 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DUX4L5P0CJ88 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DUX4L6P0CJ89 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DUX4L7P0CJ90 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 TNFSF9P41273 254 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 RBM34P42696 430 aaKnown RBP2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 KDSRQ06136 332 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 NCF4Q15080 339 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 SNRNP35Q16560 246 aaKnown RBP2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 ADNP2Q6IQ32 1131 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DNAJC24Q6P3W2 148 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 WDR86Q86TI4 376 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 NKAIN4Q8IVV8 208 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 CSGALNACT2Q8N6G5 542 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 UBAC2Q8NBM4 344 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 PRRC1Q96M27 445 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 CALN1Q9BXU9 219 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 ANKRD60Q9BZ19 345 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DDX18Q9NVP1 670 aaKnown RBP2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 SLC39A1Q9NY26 324 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 DUX4Q9UBX2 424 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
HMGB1P36-201ENST00000487709 CABIN1Q9Y6J0 2220 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 IGSF9BQ9UPX0 1349 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 PLA2R1Q13018 1463 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 H0YIV9 168 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 NVLO15381 856 aaKnown RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 RRP8O43159 456 aaKnown RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 EIF1BO60739 113 aaKnown RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 FLOT1O75955 427 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 AQP8O94778 261 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 HLA-HP01893 362 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 OPRK1P41145 380 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 EIF1P41567 113 aaKnown RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 CDK5Q00535 292 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 PPIDQ08752 370 aaKnown RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 WDR43Q15061 677 aaKnown RBP eCLIP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 PRSS8Q16651 343 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 Q5W150 140 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 TMEM53Q6P2H8 277 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 NPSR1Q6W5P4 371 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 CDKL3Q8IVW4 592 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 WDFY1Q8IWB7 410 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 LYPD1Q8N2G4 141 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 OR8U1Q8NH10 309 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 AGR3Q8TD06 166 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF75CPQ92670 426 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 PANX1Q96RD7 426 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 GPR21Q99679 349 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 PIGUQ9H490 435 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 TMEM38AQ9H6F2 299 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 AUNIPQ9H7T9 357 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZC4H2Q9NQZ6 224 aa2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 ZNF282Q9UDV7 671 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P36-201ENST00000487709 ARPC4-TTLL3A0A0A6YYG9 625 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 A0A0U1RQV1 116 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 CENPVL3A0A0U1RRI6 287 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 TSPAN11A1L157 253 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ERICH4A6NGS2 130 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 GOLGA8JA6NMD2 632 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 PTPRTO14522 1441 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 PAHP00439 452 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ASGR1P07306 291 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF286BP0CG31 522 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 GOLGA8HP0CJ92 632 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 CD37P11049 281 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 GZMAP12544 262 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ANXA8P13928 327 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ATF6P18850 670 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 OR1E1P30953 314 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 PMELP40967 661 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 RAB7AP51149 207 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 CRISP1P54107 249 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 RPS23P62266 143 aaKnown RBP2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 PRR3P79522 188 aaKnown RBP2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ALKBH6Q3KRA9 238 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 MPV17L2Q567V2 206 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 CAVIN4Q5BKX8 364 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF684Q5T5D7 378 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ANXA8L1Q5VT79 327 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 STUMQ69YW2 141 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 RWDD4Q6NW29 188 aaKnown RBP2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 H3F3CQ6NXT2 135 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 NTM-AS1Q6ZSK4 140 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ADAMTS13Q76LX8 1427 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 HMGN2P46Q86SG4 172 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF547Q8IVP9 402 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF561Q8N587 486 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 ZNF615Q8N8J6 731 aa2.21□□□□□ -2.06
HMGB1P36-201ENST00000487709 FAM184AQ8NB25 1140 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms