RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 NOTOA8MTQ0 251 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 J3QW42 95 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 M0R135 149 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ERVH48-1M5A8F1 160 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SYT7O43581 403 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SYNGR3O43761 229 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ANXA2P07355 339 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ERCC1P07992 297 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF32P17041 273 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 FSTP19883 344 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 RAB3BP20337 219 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 KIR2DL2P43627 348 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 KIR3DL2P43630 455 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SLC6A9P48067 706 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SCAND1P57086 179 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF121P58317 390 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 UBE2NP61088 152 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 RPS11P62280 158 aaKnown RBP eCLIP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 GALK2Q01415 458 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 HNRNPA0Q13151 305 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 MRPL49Q13405 166 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 CCDC92Q53HC0 331 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SOWAHCQ53LP3 525 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 DDI2Q5TDH0 399 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 TMEM211Q6ICI0 200 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 UNQ6126/PRO20091Q6UXV3 157 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 PGAP1Q75T13 922 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 DOK3Q7L591 496 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 LINGO2Q7L985 606 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 CD163Q86VB7 1156 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SKA3Q8IX90 412 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 CNEP1R1Q8N9A8 125 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 C9orf106Q8NAJ2 232 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OR5D14Q8NGL3 314 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OR6Q1Q8NGQ2 317 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OR1K1Q8NGR3 316 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OR1J2Q8NGS2 313 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OR13C3Q8NGS6 347 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 HSD17B8Q92506 261 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 TMEM106AQ96A25 262 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SNRNP40Q96DI7 357 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF837Q96EG3 531 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 TRMT61AQ96FX7 289 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF799Q96GE5 643 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 PGAM5Q96HS1 289 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 CEP19Q96LK0 163 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 CMTM3Q96MX0 182 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OR14A2Q96R54 314 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 TPK1Q9H3S4 243 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 OPA3Q9H6K4 179 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 C12orf49Q9H741 205 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 NEK6Q9HC98 313 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 NOX4Q9NPH5 578 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SLC17A5Q9NRA2 495 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 RABL2AQ9UBK7 228 aaPredicted RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 RABL2BQ9UNT1 228 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 SLC22A13Q9Y226 551 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF835Q9Y2P0 537 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 TNRC6AQ8NDV7 1962 aaKnown RBP6.31□□□□□ -1.4
CCNB3-206ENST00000487204 FREM3P0C091 2139 aa6.31□□□□□ -1.4
CCNB3-206ENST00000487204 LOC107986453A0A1B0GWG9 222 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 CIB4A0PJX0 185 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 CLDN25C9JDP6 229 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 F5H5K5 113 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 XRCC2O43543 280 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 SLC19A2O60779 497 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 WNT11O96014 354 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 PNPP00491 289 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 IGHV3-9P01782 118 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 TTRP02766 147 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 SERPINA5P05154 406 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 MMP7P09237 267 aaPredicted RBP6.3□□□□□ -1.4
CCNB3-206ENST00000487204 COX5AP20674 150 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 CCL1P22362 96 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 CRYGSP22914 178 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 TUBG1P23258 451 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 CEACAM8P31997 349 aaPredicted RBP6.3□□□□□ -1.4
CCNB3-206ENST00000487204 APLNRP35414 380 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 TGFBR1P36897 503 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 HTR5AP47898 357 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 PRKXP51817 358 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 PPP3R1P63098 170 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 PSG4Q00888 419 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF45Q02386 682 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 GUCA2AQ02747 115 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 MXD1Q05195 221 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 MFGE8Q08431 387 aaPredicted RBP6.3□□□□□ -1.4
CCNB3-206ENST00000487204 ZNF846Q147U1 533 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 GSG1Q2KHT4 349 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 KRTAP27-1Q3LI81 207 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 PABPC1L2AQ5JQF8 200 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 SPANXN2Q5MJ10 180 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 OTPQ5XKR4 325 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 LIAT1Q6ZQX7 453 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 COMMD2Q86X83 199 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 SERPINA12Q8IW75 414 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 CDH26Q8IXH8 852 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 C1orf174Q8IYL3 243 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 GCNT2Q8N0V5 402 aa6.3□□□□□ -1.4
CCNB3-206ENST00000487204 PARP16Q8N5Y8 322 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms