RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 ORAI1Q96D31 301 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 SLCO5A1Q9H2Y9 848 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 KCNG2Q9UJ96 466 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 ELF5Q9UKW6 265 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-228ENST00000486227 MRPS28Q9Y2Q9 187 aaKnown RBP9.96□□□□□ -0.82
HDAC6-228ENST00000486227 CACNA1EQ15878 2313 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 PRAMEF27A3QJZ7 478 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 OR6C65A6NJZ3 312 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 SHISA8B8ZZ34 492 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 IMPA2O14732 288 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 OR8U9P0C7N5 309 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 CDK5R1Q15078 307 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 ST3GAL2Q16842 350 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 LAIR2Q6ISS4 152 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 CBLN3Q6UW01 205 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 OR10Z1Q8NGY1 313 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 ANKRD9Q96BM1 317 aaPredicted RBP9.96□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF768Q9H5H4 540 aaKnown RBP9.96□□□□□ -0.82
HDAC6-228ENST00000486227 P4HTMQ9NXG6 502 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 DUSP13Q9UII6 198 aa9.96□□□□□ -0.82
HDAC6-228ENST00000486227 CDC42EP2O14613 210 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 NTN1O95631 604 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 IFNA4P05014 189 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 MGMTP16455 207 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CDK2P24941 298 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF93P35789 620 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF117Q03924 483 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF74Q16587 644 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 MAML2Q8IZL2 1156 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 PRR18Q8N4B5 295 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 RELL2Q8NC24 303 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SYT3Q9BQG1 590 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 TSPAN10Q9H1Z9 355 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CCDC86Q9H6F5 360 aaKnown RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 REV1Q9UBZ9 1251 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 STEAP1Q9UHE8 339 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 B3GALT5Q9Y2C3 310 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 A0A0B4J2A0 478 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 TIMM8AO60220 97 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 LIMS3P0CW19 117 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 LIMS4P0CW20 117 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 RAC2P15153 192 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CTRB1P17538 263 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF674Q2M3X9 581 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CTRB2Q6GPI1 263 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 THSD4Q6ZMP0 1018 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 OR2AK2Q8NG84 335 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 MARVELD3Q96A59 401 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SMIM19Q96E16 107 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SPACA9Q96E40 222 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 GFOD1Q9NXC2 390 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SHPKQ9UHJ6 478 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SLC22A13Q9Y226 551 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CKAP5Q14008 2032 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 LOC107986453A0A1B0GWG9 222 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 RAB19A4D1S5 217 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 PMS2P1A4D2B8 440 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 TMEM200CA6NKL6 621 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 HRKO00198 91 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CYR61O00622 381 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 OR7C1O76099 320 aaPredicted RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 IL5P05113 134 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 RFC3P40938 356 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 RPL19P84098 196 aaKnown RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 NPSR1Q6W5P4 371 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 CMTM4Q8IZR5 234 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SLC22A24Q8N4F4 322 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 FBXW5Q969U6 566 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 RAB39BQ96DA2 213 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 MRGPRX4Q96LA9 322 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 AUNIPQ9H7T9 357 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZMAT5Q9UDW3 170 aaKnown RBP9.95□□□□□ -0.82
HDAC6-228ENST00000486227 B3GALT1Q9Y5Z6 326 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 PIGBOS1A0A0B4J2F0 54 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 FOSL1P15407 271 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF44P15621 663 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 PPT1P50897 306 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 GSG1Q2KHT4 349 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF679Q8IYX0 411 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 OR51S1Q8NGJ8 323 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 SLAMF6Q96DU3 332 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ZNF681Q96N22 645 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 MMP25Q9NPA2 562 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 PCDHGA1Q9Y5H4 931 aa9.95□□□□□ -0.82
HDAC6-228ENST00000486227 ARID1AO14497 2285 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 A0A0B4J203 849 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 AQP8O94778 261 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 CNOT4O95628 575 aaKnown RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 LPLP06858 475 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 RAB6AP20340 208 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TAS2R20P59543 309 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 PSG6Q00889 435 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 HSD17B13Q7Z5P4 300 aaPredicted RBP9.94□□□□□ -0.82
HDAC6-228ENST00000486227 TMEM52Q8NDY8 209 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 PIGTQ969N2 578 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 SCPEP1Q9HB40 452 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 SLC22A23A1A5C7 686 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 CXCL13O43927 109 aa9.94□□□□□ -0.82
HDAC6-228ENST00000486227 LSM11P83369 360 aaKnown RBP eCLIP9.94□□□□□ -0.822e-7■■■■□ 20.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms