RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 L3HYPDHQ96EM0 354 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 MAELQ96JY0 434 aaKnown RBP4.3□□□□□ -1.72
PTPN4-210ENST00000485247 PRR25Q96S07 402 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 LYSTQ99698 3801 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 GPR61Q9BZJ8 451 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF702PQ9H963 129 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 RAB18Q9NP72 206 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 SIRT7Q9NRC8 400 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 MAN2C1Q9NTJ4 1040 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 ATAD3AQ9NVI7 634 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 GLTPQ9NZD2 209 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 TBK1Q9UHD2 729 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 TMCC3Q9ULS5 477 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 FIS1Q9Y3D6 152 aa4.3□□□□□ -1.72
PTPN4-210ENST00000485247 A0A087WUJ7 227 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 A0A1B0GVI7 797 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 A0A1B0GW55 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ELOVL7A1L3X0 281 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 TMEM114B3SHH9 223 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 H3BSA7 217 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 FBP2O00757 339 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 LSM1O15116 133 aaKnown RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 FSTL3O95633 263 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DBIP07108 87 aaKnown RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 QDPRP09417 244 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4L2P0CJ85 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4L3P0CJ86 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4L5P0CJ88 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4L6P0CJ89 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4L7P0CJ90 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 PAX6P26367 422 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 RPL3P39023 403 aaKnown RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 PMELP40967 661 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 HTR5AP47898 357 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ERFP50548 548 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ARHGDIAP52565 204 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ELLP55199 621 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 HOXC5Q00444 222 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 PUDPQ08623 228 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 KLRD1Q13241 179 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 CD300EQ496F6 205 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 SFRP4Q6FHJ7 346 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4L9Q6RFH8 374 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ARL9Q6T311 187 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 NHLRC1Q6VVB1 395 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF836Q6ZNA1 936 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 NET1Q7Z628 596 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 IGFN1Q86VF2 1251 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 SBSPONQ8IVN8 264 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 C1orf87Q8N0U7 546 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 NATD1Q8N6N6 113 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 OR4A15Q8NGL6 344 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 FBXO25Q8TCJ0 367 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 SLC38A4Q969I6 547 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 TMEM54Q969K7 222 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 COQ8BQ96D53 544 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 FAM234AQ9H0X4 552 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 PCDHAC1Q9H158 963 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 SLC38A1Q9H2H9 487 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 KLK15Q9H2R5 256 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 KCNN2Q9H2S1 579 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 MTHFD2LQ9H903 347 aaPredicted RBP4.29□□□□□ -1.72
PTPN4-210ENST00000485247 CCNB1IP1Q9NPC3 277 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 ONECUT1Q9UBC0 465 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 DUX4Q9UBX2 424 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 GIMAP2Q9UG22 337 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 SNX12Q9UMY4 172 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 TMED5Q9Y3A6 229 aa4.29□□□□□ -1.72
PTPN4-210ENST00000485247 RYR1P21817 5038 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 IGKV1D-42A0A075B6H8 117 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TRAV36DV7A0A075B6V5 113 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 EXOC1LA0A1B0GW35 172 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TCRBV4S1A1TA0A5B7 111 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 LRRN3E7EW58 273 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 C11orf98E9PRG8 122 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 HMGN4O00479 90 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ADAM20O43506 726 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 RAMP3O60896 148 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 LHBP01229 141 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 C1QCP02747 245 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 IRF2P14316 349 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF32P17041 273 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 GSTM3P21266 225 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 KITLGP21583 273 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 RPS4Y1P22090 263 aaKnown RBP4.28□□□□□ -1.72
PTPN4-210ENST00000485247 CHATP28329 748 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 SRP9P49458 86 aaKnown RBP4.28□□□□□ -1.72
PTPN4-210ENST00000485247 BMXP51813 675 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 PLTPP55058 493 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ERVK-25P63136 954 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 PSG4Q00888 419 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 GALEQ14376 348 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 ZNF181Q2M3W8 571 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 LRRC75BQ2VPJ9 315 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 TMEM95Q3KNT9 176 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 KHDC1LQ5JSQ8 128 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 METAP1DQ6UB28 335 aaPredicted RBP4.28□□□□□ -1.72
PTPN4-210ENST00000485247 LRRC74BQ6ZQY2 392 aa4.28□□□□□ -1.72
PTPN4-210ENST00000485247 OVCH2Q7RTZ1 564 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms