RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FFAR1O14842 300 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 ENSAO43768 121 aaKnown RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 FAM20BO75063 409 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 GUCA1AP43080 201 aaPredicted RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 ELF3P78545 371 aaPredicted RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 TTMPQ5BVD1 217 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 RABL3Q5HYI8 236 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 NANOGP8Q6NSW7 305 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 TBPL2Q6SJ96 375 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 COLCA1Q6ZS62 124 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 OR13C2Q8NGS9 318 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 TBC1D15Q8TC07 691 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 Q8TCH9 128 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 POLR2J2Q9GZM3 115 aaKnown RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 POLR2J3Q9H1A7 115 aaKnown RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 RAB21Q9UL25 225 aa10.63□□□□□ -0.71
UBR4-213ENST00000483922 COA3Q9Y2R0 106 aaPredicted RBP10.63□□□□□ -0.71
UBR4-213ENST00000483922 ZNF816-ZNF321PA0A0X1KG74 233 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 MEGF11A6BM72 1044 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 C5orf63A6NC05 138 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 J3KTA2 159 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 TSPAN9O75954 239 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 NR2C1P13056 603 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 FPR3P25089 353 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 YAP1P46937 504 aaKnown RBP10.62□□□□□ -0.71
UBR4-213ENST00000483922 ARF6P62330 175 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 PRB3Q04118 309 aaPredicted RBP10.62□□□□□ -0.71
UBR4-213ENST00000483922 PRKCDQ05655 676 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 KRTAP27-1Q3LI81 207 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 NLRC3Q7RTR2 1065 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 NRMQ8IXM6 262 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 GATAD2BQ8WXI9 593 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 RASD2Q96D21 266 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 ZNF583Q96ND8 569 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 TMBIM4Q9HC24 238 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 UFSP2Q9NUQ7 469 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 TMEM100Q9NV29 134 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 NKIRAS1Q9NYS0 192 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 RHCGQ9UBD6 479 aa10.62□□□□□ -0.71
UBR4-213ENST00000483922 TEX13CA0A0J9YWL9 993 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 A0A1B0GW55 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 PRSS37A4D1T9 235 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 A6NIZ1 184 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 LRRC30A6NM36 301 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 PTP4A3O75365 173 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L2P0CJ85 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L3P0CJ86 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L4P0CJ87 422 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L5P0CJ88 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L6P0CJ89 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L7P0CJ90 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 CD200P41217 278 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DLX1P56177 255 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 RAP1BP61224 184 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 LSM6P62312 80 aaKnown RBP10.61□□□□□ -0.71
UBR4-213ENST00000483922 RAP1AP62834 184 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 POU4F2Q12837 409 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 AQP6Q13520 282 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 NFYCQ13952 458 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 GK2Q14410 553 aaPredicted RBP10.61□□□□□ -0.71
UBR4-213ENST00000483922 MEP1BQ16820 701 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4L9Q6RFH8 374 aaPredicted RBP10.61□□□□□ -0.71
UBR4-213ENST00000483922 OAFQ86UD1 273 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 RASSF5Q8WWW0 418 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 COG8Q96MW5 612 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 TECTBQ96PL2 329 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 TRIM15Q9C019 465 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 DUX4Q9UBX2 424 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 LHFPL6Q9Y693 200 aa10.61□□□□□ -0.71
UBR4-213ENST00000483922 A0A087WUU8 490 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 FXYD1O00168 92 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 DCTN6O00399 190 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 OR10H3O60404 316 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 SLC16A7O60669 478 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 PTBP3O95758 552 aaKnown RBP10.6□□□□□ -0.71
UBR4-213ENST00000483922 LIPFP07098 398 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 CD14P08571 375 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 CSF1P09603 554 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 SLC9A3P48764 834 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 NPY4RP50391 375 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 EGR3Q06889 387 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 ST3GAL3Q11203 375 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 KCNMB1Q16558 191 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 CYBRD1Q53TN4 286 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 SLC35E4Q6ICL7 350 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 CORO6Q6QEF8 472 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 PTCHD4Q6ZW05 846 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 GLB1L2Q8IW92 636 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 C1orf87Q8N0U7 546 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 CELF2-AS1Q8N7Q2 184 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 PPP1R35Q8TAP8 253 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 APOBEC3DQ96AK3 386 aaPredicted RBP10.6□□□□□ -0.71
UBR4-213ENST00000483922 TSSK2Q96PF2 358 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 ECSITQ9BQ95 431 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 SYT4Q9H2B2 425 aa10.6□□□□□ -0.71
UBR4-213ENST00000483922 GMPR2Q9P2T1 348 aaKnown RBP10.6□□□□□ -0.71
UBR4-213ENST00000483922 BAG5Q9UL15 447 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms