RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 NKD1Q969G9 470 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 POTEKPQ9BYX7 375 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 SCPEP1Q9HB40 452 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 MED29Q9NX70 200 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 VSIG4Q9Y279 399 aa13.26□□□□□ -0.29
ATG4B-220ENST00000482507 A0A1B0GTI1 187 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 TMEM269A0A1B0GVZ9 245 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 EIF1AYO14602 144 aaKnown RBP13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CCSO14618 274 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 AQP8O94778 261 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CER1O95813 267 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 ISG15P05161 165 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 ACHEP22303 614 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CRABP1P29762 137 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 HSD11B2P80365 405 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 RIPPLY1Q0D2K3 151 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 SPEM2Q0P670 501 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 SCGB2B2Q4G0G5 96 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 TMPRSS9Q7Z410 1059 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 SLC51BQ86UW2 128 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 PAQR4Q8N4S7 273 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-220ENST00000482507 GVQW1Q8N7I0 195 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 MVB12AQ96EY5 273 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 NUDT22Q9BRQ3 303 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 RAB33BQ9H082 229 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 COPS7AQ9UBW8 275 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 GDF2Q9UK05 429 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-220ENST00000482507 OR14I1A6ND48 311 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CYB5AP00167 134 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 GMFBP60983 142 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 OR7A5Q15622 319 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 PCK2Q16822 640 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 PLA2G2CQ5R387 149 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 RNF144BQ7Z419 303 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CD163Q86VB7 1156 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 PRSS33Q8NF86 280 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CCDC107Q8WV48 283 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 KCNK17Q96T54 332 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 SLC25A21Q9BQT8 299 aaPredicted RBP13.25□□□□□ -0.29
ATG4B-220ENST00000482507 DUSP23Q9BVJ7 150 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 B3GNT4Q9C0J1 378 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 CNTD2Q9H8S5 307 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 UPB1Q9UBR1 384 aa13.25□□□□□ -0.29
ATG4B-220ENST00000482507 LOC100509620A0A075B734 347 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ARPC4-TTLL3A0A0A6YYG9 625 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 SHISA8B8ZZ34 492 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 RAB27BO00194 218 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 TSPAN4O14817 238 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 HPP00738 406 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 UNC119Q13432 240 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 FAM74A1Q5RGS3 127 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 RABEPKQ7Z6M1 372 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF546Q86UE3 836 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 SUMF1Q8NBK3 374 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 OR5M8Q8NGP6 311 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 AQP3Q92482 292 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 CYYR1Q96J86 154 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 PFDN2Q9UHV9 154 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 RIF1Q5UIP0 2472 aaKnown RBP13.24□□□□□ -0.29
ATG4B-220ENST00000482507 SIGLEC5O15389 551 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 CD8AP01732 235 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF823P16415 610 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 FBXW4P57775 412 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF260Q3ZCT1 412 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 OR52W1Q6IF63 320 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 LIN54Q6MZP7 749 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 PAPD4Q6PIY7 484 aaKnown RBP13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ARSKQ6UWY0 536 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ZNF813Q6ZN06 617 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 FJX1Q86VR8 437 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 PDZD9Q8IXQ8 264 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 BEST3Q8N1M1 668 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 OR52N4Q8NGI2 321 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 THAP3Q8WTV1 239 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-220ENST00000482507 ST8SIA4Q92187 359 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 FGGYQ96C11 551 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 SEC22AQ96IW7 307 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 PTGES2Q9H7Z7 377 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 MYOZ1Q9NP98 299 aaPredicted RBP13.24□□□□□ -0.29
ATG4B-220ENST00000482507 CENPMQ9NSP4 180 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 DMXL1Q9Y485 3027 aa13.24□□□□□ -0.29
ATG4B-220ENST00000482507 OR5H14A6NHG9 310 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 ARL4DP49703 201 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 POU3F1Q03052 451 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-220ENST00000482507 PMEPA1Q969W9 287 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 FAM46BQ96A09 425 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 ADAT3Q96EY9 351 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-220ENST00000482507 DPYSL5Q9BPU6 564 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 EMC6Q9BV81 110 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 SLC22A11Q9NSA0 550 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 FAM206AQ9NX38 181 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 SLC5A6Q9Y289 635 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 KMT2EQ8IZD2 1858 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 OTOGLQ3ZCN5 2332 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 MEGF11A6BM72 1044 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 OR2T1O43869 369 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 ATF4P18848 351 aaPredicted RBP13.23□□□□□ -0.29
ATG4B-220ENST00000482507 EIF1AXP47813 144 aaKnown RBP13.23□□□□□ -0.29
ATG4B-220ENST00000482507 CCL7P80098 99 aa13.23□□□□□ -0.29
ATG4B-220ENST00000482507 QRFPP83859 136 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms