RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 ISYNA1Q9NPH2 558 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 CYB5R1Q9UHQ9 305 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 MRM2Q9UI43 246 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 LAMP5Q9UJQ1 280 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 POLR1DQ9Y2S0 133 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 TMEM14AQ9Y6G1 99 aa5.82□□□□□ -1.48
USP48-208ENST00000479177 SPTAN1Q13813 2472 aaKnown RBP5.82□□□□□ -1.48
USP48-208ENST00000479177 PLCE1Q9P212 2302 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 DPPA5A6NC42 116 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 METTL15A6NJ78 407 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 HSPB2A8KAH6 182 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 J3QLW9 94 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 MAGEB4O15481 346 aaPredicted RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 SULT1C4O75897 302 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 IL18BPO95998 194 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 MT-ND5P03915 603 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 CST2P09228 141 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 OR8G3PP0DMU2 310 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 ZNF19P17023 458 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 NPR2P20594 1047 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 COX5AP20674 150 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 CTSSP25774 331 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 MPGP29372 298 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 LIPAP38571 399 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 OPRL1P41146 370 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 GUCA1AP43080 201 aaPredicted RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 CA7P43166 264 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 CAPZA2P47755 286 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 PER3P56645 1201 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 OR12D2P58182 307 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 HIST1H3AP68431 136 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 ARF1P84077 181 aaKnown RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 BDH1Q02338 343 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 ACSM1Q08AH1 577 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 FAPQ12884 760 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 MLLT11Q13015 90 aaPredicted RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 AQP6Q13520 282 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 EIF2B1Q14232 305 aaKnown RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 MED22Q15528 200 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 HSPB2Q16082 182 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SSX1Q16384 188 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SGCAQ16586 387 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 TSTQ16762 297 aaKnown RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 NRN1LQ496H8 165 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 HIST2H3PS2Q5TEC6 136 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 FAM27BQ5VT28 67 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 C9orf135Q5VTT2 229 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 CORO6Q6QEF8 472 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 KLHL24Q6TFL4 600 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 LRRN1Q6UXK5 716 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 ZNF813Q6ZN06 617 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 PLEKHG7Q6ZR37 379 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 Q6ZT83 130 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 NCCRP1Q6ZVX7 275 aaPredicted RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 HIST2H3AQ71DI3 136 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 EGFL6Q8IUX8 553 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 UBE2J2Q8N2K1 259 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SLC22A24Q8N4F4 322 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 OR1K1Q8NGR3 316 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 THEM6Q8WUY1 208 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SNX33Q8WV41 574 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 RNF133Q8WVZ7 376 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 FBXW5Q969U6 566 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 STARD4Q96DR4 205 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 YIPF6Q96EC8 236 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 PELI1Q96FA3 418 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 DMRTA2Q96SC8 542 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 MYCBPQ99417 103 aaPredicted RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 MGLLQ99685 303 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 PNRC2Q9NPJ4 139 aaKnown RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 TRIM36Q9NQ86 728 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 BATF3Q9NR55 127 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 ACOXLQ9NUZ1 547 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SLCO1C1Q9NYB5 712 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 ZNF224Q9NZL3 707 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 UPB1Q9UBR1 384 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SH3BGRL2Q9UJC5 107 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 GNG8Q9UK08 70 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 IKZF2Q9UKS7 526 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 PROCRQ9UNN8 238 aa5.81□□□□□ -1.48
USP48-208ENST00000479177 SMG1Q96Q15 3661 aaKnown RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 UBR5O95071 2799 aaPredicted RBP5.81□□□□□ -1.48
USP48-208ENST00000479177 A0A0G2JNJ9 132 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 SMIM31A0A1B0GVY4 71 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 FAM90A27PA6NNH2 459 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 ZNF878C9JN71 531 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 E9PI62 339 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 E9PLN8 166 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 PSMD9O00233 223 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 RER1O15258 196 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 TMCC2O75069 709 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 FARS2O95363 451 aaKnown RBP5.8□□□□□ -1.48
USP48-208ENST00000479177 KRT8P05787 483 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 MMP7P09237 267 aaPredicted RBP5.8□□□□□ -1.48
USP48-208ENST00000479177 HSMCR30P0CW71 290 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 CPEP16870 476 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 IGHV1-2P23083 117 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 TTKP33981 857 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 CASP6P55212 293 aa5.8□□□□□ -1.48
USP48-208ENST00000479177 TAS2R43P59537 309 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms