RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 LOXP28300 417 aaPredicted RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 DCTDP32321 178 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 LIPAP38571 399 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 CX3CR1P49238 355 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 RIDAP52758 137 aaKnown RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 SORDQ00796 357 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 SPOCK1Q08629 439 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 CDK5R1Q15078 307 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 MED22Q15528 200 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 WDR38Q5JTN6 314 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 SYT6Q5T7P8 510 aaPredicted RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 DMKNQ6E0U4 476 aaPredicted RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 FDX2Q6P4F2 183 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 P2RY8Q86VZ1 359 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 CATSPERDQ86XM0 798 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 FAM169BQ8N8A8 192 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 ACBD4Q8NC06 268 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 LINC01560Q8TB33 94 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 PGLYRP3Q96LB9 341 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 COG8Q96MW5 612 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 DCLRE1CQ96SD1 692 aaKnown RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 SOX7Q9BT81 388 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 KCNN2Q9H2S1 579 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 CHCHD3Q9NX63 227 aaKnown RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 SF3B6Q9Y3B4 125 aaKnown RBP11.35□□□□□ -0.59
CHD3-210ENST00000479080 R4GMQ9 66 aa11.35□□□□□ -0.59
CHD3-210ENST00000479080 USP9XQ93008 2570 aaPredicted RBP11.34□□□□□ -0.59
CHD3-210ENST00000479080 OR4C45A6NMZ5 311 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 F5H5K5 113 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 M0R135 149 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ZNF35P13682 527 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 STOMP27105 288 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 TGM4P49221 684 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ZNF83P51522 516 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ZNF121P58317 390 aaPredicted RBP11.34□□□□□ -0.59
CHD3-210ENST00000479080 GRB2P62993 217 aaKnown RBP11.34□□□□□ -0.59
CHD3-210ENST00000479080 GALK2Q01415 458 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 MLLT11Q13015 90 aaPredicted RBP11.34□□□□□ -0.59
CHD3-210ENST00000479080 TSTQ16762 297 aaKnown RBP11.34□□□□□ -0.59
CHD3-210ENST00000479080 SNAI3Q3KNW1 292 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 TMPRSS11AQ6ZMR5 421 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 COLCA1Q6ZS62 124 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 KCTD20Q7Z5Y7 419 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ZNF101Q8IZC7 436 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 SLC30A7Q8NEW0 376 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 OR8B12Q8NGG6 310 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 OR2G2Q8NGZ5 317 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 OR10AC1Q8NH08 325 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ZNF799Q96GE5 643 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ZC3HAV1LQ96H79 300 aaKnown RBP11.34□□□□□ -0.59
CHD3-210ENST00000479080 MGLLQ99685 303 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 DOK1Q99704 481 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 MROQ9BYG7 248 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 ISYNA1Q9NPH2 558 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 FRRS1LQ9P0K9 344 aa11.34□□□□□ -0.59
CHD3-210ENST00000479080 HCFC1P51610 2035 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 FLNCQ14315 2725 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 IGHV2OR16-5A0A0B4J2B6 119 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 PNMA8CA0A1B0GUJ8 204 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 C5orf49A4QMS7 147 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 DPRXA6NFQ7 191 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 CLPTM1O96005 669 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 NGFP01138 241 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 IGLV3-1P01715 115 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 TTRP02766 147 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 PSMB9P28065 219 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 HOXC12P31275 282 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 MMP16P51512 607 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 BDH1Q02338 343 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 ECH1Q13011 328 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 TPBGQ13641 420 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 ALKBH1Q13686 389 aaKnown RBP11.33□□□□□ -0.6
CHD3-210ENST00000479080 BLMHQ13867 455 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 MSMPQ1L6U9 139 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 ARMCX4Q5H9R4 360 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 TMEM255AQ5JRV8 349 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 ALKBH2Q6NS38 261 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 RFPL4BQ6ZWI9 263 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 WFDC8Q8IUA0 241 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 EGFL6Q8IUX8 553 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 ZNF283Q8N7M2 679 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 OR13F1Q8NGS4 319 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 OR13C5Q8NGS8 318 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 YIPF6Q96EC8 236 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 TRMT61AQ96FX7 289 aaKnown RBP11.33□□□□□ -0.6
CHD3-210ENST00000479080 LYZL4Q96KX0 146 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 C1QTNF5Q9BXJ0 243 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 DIDO1Q9BTC0 2240 aaKnown RBP11.33□□□□□ -0.6
CHD3-210ENST00000479080 DOPEY1Q5JWR5 2465 aa11.33□□□□□ -0.6
CHD3-210ENST00000479080 CACNA1CQ13936 2221 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 TMEM269A0A1B0GVZ9 245 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 LOC110117498-PIK3R3F6TDL0 507 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 J3QKU1 62 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 M0R1B8 84 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 ICMTO60725 284 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 SMPD2O60906 423 aa11.32□□□□□ -0.6
CHD3-210ENST00000479080 EPXP11678 715 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms