RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 SLC25A19Q9HC21 320 aa17.34■□□□□ 0.37
TRIM8-203ENST00000479004 TBCCD1Q9NVR7 557 aa17.34■□□□□ 0.37
TRIM8-203ENST00000479004 CGGBP1Q9UFW8 167 aaPredicted RBP17.34■□□□□ 0.37
TRIM8-203ENST00000479004 RRP15Q9Y3B9 282 aaKnown RBP17.34■□□□□ 0.37
TRIM8-203ENST00000479004 ZSCAN5BA6NJL1 495 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 CASQ2O14958 399 aaPredicted RBP17.33■□□□□ 0.36
TRIM8-203ENST00000479004 SGCEO43556 437 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 DOK2O60496 412 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 MPZL1O95297 269 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 ABHD16AO95870 558 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 RENP00797 406 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 IFNGP01579 166 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 ADH4P08319 380 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 HIST1H1CP16403 213 aaKnown RBP17.33■□□□□ 0.36
TRIM8-203ENST00000479004 CDKN2AP42771 156 aaKnown RBP17.33■□□□□ 0.36
TRIM8-203ENST00000479004 HTR5AP47898 357 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 LSM6P62312 80 aaKnown RBP17.33■□□□□ 0.36
TRIM8-203ENST00000479004 CDK5Q00535 292 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 MVKQ03426 396 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 AQP6Q13520 282 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 RIPK1Q13546 671 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 KRTAP24-1Q3LI83 254 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 SLC35F1Q5T1Q4 408 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 AVPI1Q5T686 147 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 VASH1Q7L8A9 365 aaPredicted RBP17.33■□□□□ 0.36
TRIM8-203ENST00000479004 GLB1L2Q8IW92 636 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 OR52E2Q8NGJ4 325 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 OR4K13Q8NH42 304 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 TMEM186Q96B77 213 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 ELMOD3Q96FG2 381 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 GABARAPL3Q9BY60 117 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 NUAK2Q9H093 628 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 RERGLQ9H628 205 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 CACNG2Q9Y698 323 aa17.33■□□□□ 0.36
TRIM8-203ENST00000479004 CLDN25C9JDP6 229 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 MSMBP08118 114 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 TUBG1P23258 451 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.32■□□□□ 0.36
TRIM8-203ENST00000479004 PSG7Q13046 419 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 PTGES3Q15185 160 aaKnown RBP17.32■□□□□ 0.36
TRIM8-203ENST00000479004 HFEQ30201 348 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 OTPQ5XKR4 325 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 LEG1Q6P5S2 330 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 IQCF1Q8N6M8 205 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 PACRGLQ8N7B6 248 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 SLC29A1Q99808 456 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 POFUT1Q9H488 388 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 RIBC2Q9H4K1 309 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 TUBG2Q9NRH3 451 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 HIF1ANQ9NWT6 349 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 PLEK2Q9NYT0 353 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 ASH2LQ9UBL3 628 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 NKX1-2Q9UD57 310 aaPredicted RBP17.32■□□□□ 0.36
TRIM8-203ENST00000479004 ZDHHC8Q9ULC8 765 aa17.32■□□□□ 0.36
TRIM8-203ENST00000479004 TANC2Q9HCD6 1990 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 RIIAD1A6NNX1 92 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 SRP14P37108 136 aaKnown RBP17.31■□□□□ 0.36
TRIM8-203ENST00000479004 KCNMB1Q16558 191 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 CCDC92Q53HC0 331 aaPredicted RBP17.31■□□□□ 0.36
TRIM8-203ENST00000479004 LPCAT4Q643R3 524 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 ACSM5Q6NUN0 579 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 DNM1P34Q6PK57 102 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 NPEPL1Q8NDH3 523 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 SDR9C7Q8NEX9 313 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 OR51F2Q8NH61 342 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 DIRC2Q96SL1 478 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 NMNAT3Q96T66 252 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 PRRG3Q9BZD7 231 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 EGLN1Q9GZT9 426 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 ZNF665Q9H7R5 613 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 LPAR2Q9HBW0 351 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 CMC2Q9NRP2 79 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 WIPI2Q9Y4P8 454 aa17.31■□□□□ 0.36
TRIM8-203ENST00000479004 OR6C6A6NF89 314 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 ZAR1LA6NP61 321 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 CD55P08174 381 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 ZNF3P17036 446 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 PEX2P28328 305 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 CRABP1P29762 137 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 SRSF2Q01130 221 aaKnown RBP17.3■□□□□ 0.36
TRIM8-203ENST00000479004 LRRC36Q1X8D7 754 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 ZMAT1Q5H9K5 638 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 OGFRL1Q5TC84 451 aaPredicted RBP17.3■□□□□ 0.36
TRIM8-203ENST00000479004 OR1F12Q8NHA8 337 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 SLC7A6Q92536 515 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 CCL17Q92583 94 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 RDH12Q96NR8 316 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 TSSK2Q96PF2 358 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 MSL2Q9HCI7 577 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 STARD10Q9Y365 291 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 GRIP1Q9Y3R0 1128 aa17.3■□□□□ 0.36
TRIM8-203ENST00000479004 DCTN6O00399 190 aa17.29■□□□□ 0.36
TRIM8-203ENST00000479004 TIMM8AO60220 97 aaPredicted RBP17.29■□□□□ 0.36
TRIM8-203ENST00000479004 GPANK1O95872 356 aa17.29■□□□□ 0.36
TRIM8-203ENST00000479004 CDK5R2Q13319 367 aa17.29■□□□□ 0.36
TRIM8-203ENST00000479004 SPRNQ5BIV9 151 aa17.29■□□□□ 0.36
TRIM8-203ENST00000479004 ZNF362Q5T0B9 420 aaPredicted RBP17.29■□□□□ 0.36
TRIM8-203ENST00000479004 SLX4IPQ5VYV7 408 aa17.29■□□□□ 0.36
TRIM8-203ENST00000479004 TMEM236Q5W0B7 351 aa17.29■□□□□ 0.36
TRIM8-203ENST00000479004 RFLNBQ8N5W9 214 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms