RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 NELFBQ8WX92 580 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 FICDQ9BVA6 458 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 TM6SF2Q9BZW4 377 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 EHD1Q9H4M9 534 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 UCK1Q9HA47 277 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CSNK1G1Q9HCP0 422 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 SLC40A1Q9NP59 571 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 PLSCR3Q9NRY6 295 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 ANAPC11Q9NYG5 84 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 ADAM22Q9P0K1 906 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 ACTR3BQ9P1U1 418 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 SPRR3Q9UBC9 169 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 CTSFQ9UBX1 484 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 TMCC3Q9ULS5 477 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 SNX12Q9UMY4 172 aa3.47□□□□□ -1.85
CCDC171-207ENST00000478913 SAMD4AQ9UPU9 718 aaKnown RBP3.47□□□□□ -1.85
CCDC171-207ENST00000478913 FAT1Q14517 4588 aa3.46□□□□□ -1.85
CCDC171-207ENST00000478913 PCM1Q15154 2024 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 TRIM64CA6NLI5 447 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ANKRD65E5RJM6 399 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 KLRC4O43908 158 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 SCGB2A1O75556 95 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ATP5HO75947 161 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 EPPINO95925 133 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 GYPCP04921 128 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 HPDP32754 393 aaPredicted RBP3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ADRA1AP35348 466 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 LONP1P36776 959 aaKnown RBP3.46□□□□□ -1.86
CCDC171-207ENST00000478913 MAGEA1P43355 309 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 RGS1Q08116 209 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 C2orf54Q08AI8 447 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ITIH4Q14624 930 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 PPP1R7Q15435 360 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ZNF311Q5JNZ3 666 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 LCE3EQ5T5B0 92 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 PVRIGQ6DKI7 326 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 LRRC8BQ6P9F7 803 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 LANCL3Q6ZV70 420 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 FRA10AC1Q70Z53 315 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 CENPUQ71F23 418 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 TRPM8Q7Z2W7 1104 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 LHFPL4Q7Z7J7 247 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 SYCE1Q8N0S2 351 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 GCNT2Q8N0V5 402 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ARHGAP18Q8N392 663 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 SPATA4Q8NEY3 305 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 ASZ1Q8WWH4 475 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 CHMP6Q96FZ7 201 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 PAGE5Q96GU1 130 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 C16orf74Q96GX8 76 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 NOL4LQ96MY1 436 aaPredicted RBP3.46□□□□□ -1.86
CCDC171-207ENST00000478913 SLC30A2Q9BRI3 323 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 CNPY3Q9BT09 278 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 RAB34Q9BZG1 259 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 RAB33BQ9H082 229 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 NHEJ1Q9H9Q4 299 aaPredicted RBP3.46□□□□□ -1.86
CCDC171-207ENST00000478913 FAM49BQ9NUQ9 324 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 XPO7Q9UIA9 1087 aaKnown RBP3.46□□□□□ -1.86
CCDC171-207ENST00000478913 SLC17A4Q9Y2C5 497 aa3.46□□□□□ -1.86
CCDC171-207ENST00000478913 UTP11Q9Y3A2 253 aaKnown RBP3.46□□□□□ -1.86
CCDC171-207ENST00000478913 IGHV1-45A0A0A0MS14 117 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 OR5K4A6NMS3 321 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 F8WDY8 70 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 SMIM24O75264 130 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 GPX5O75715 221 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 OR2B3O76000 313 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CLPXO76031 633 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 GNA14O95837 355 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 IFNW1P05000 195 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CXCR2P25025 360 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 ALDH3A1P30838 453 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 PCK1P35558 622 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 RPL29P47914 159 aaKnown RBP3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CD151P48509 253 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 LIM2P55344 173 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 RIPK1Q13546 671 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CHI3L2Q15782 390 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 OR2B11Q5JQS5 317 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 GALNT17Q6IS24 598 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 NIPAL3Q6P499 406 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CLEC20AQ6ZU45 233 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 ANKRD37Q7Z713 158 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 COMTD1Q86VU5 262 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 PIANPQ8IYJ0 282 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 ARL6IP6Q8N6S5 226 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 C12orf29Q8N999 325 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 TMEM161BQ8NDZ6 487 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 OR10H4Q8NGA5 316 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 ITFG2Q969R8 447 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 TSC22D3Q99576 134 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CCDC77Q9BR77 488 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 TUBGCP2Q9BSJ2 902 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 BPESC1Q9GZL8 116 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 VCX3BQ9H321 246 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 PTGES2Q9H7Z7 377 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 WDR54Q9H977 334 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 CAB39LQ9H9S4 337 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 VCX3AQ9NNX9 186 aa3.45□□□□□ -1.86
CCDC171-207ENST00000478913 MRPL39Q9NYK5 338 aaKnown RBP3.45□□□□□ -1.86
CCDC171-207ENST00000478913 C3orf18Q9UK00 162 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms