RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 SFTPCP11686 197 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 OTX1P32242 354 aaPredicted RBP25.2■■□□□ 1.63
VEGFA-211ENST00000476772 SOX2P48431 317 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 EIF2S3LQ2VIR3 472 aaKnown RBP25.2■■□□□ 1.63
VEGFA-211ENST00000476772 ZFP3Q96NJ6 502 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 DERL3Q96Q80 235 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 RNF121Q9H920 327 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 NOX4Q9NPH5 578 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 NUFIP1Q9UHK0 495 aaKnown RBP25.2■■□□□ 1.63
VEGFA-211ENST00000476772 TINAGQ9UJW2 476 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 N6AMT1Q9Y5N5 214 aa25.2■■□□□ 1.63
VEGFA-211ENST00000476772 MAP1BP46821 2468 aaKnown RBP25.2■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF503-AS2A6NEH8 195 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 OR6C6A6NF89 314 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 PIN1P1O15428 100 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 CLPXO76031 633 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 CGAP01215 116 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 TTRP02766 147 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 GLI4P10075 376 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 EDN3P14138 238 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 CRYGSP22914 178 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 ANOS1P23352 680 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 MTNR1BP49286 362 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 HIKESHIQ53FT3 197 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 ELMOD2Q8IZ81 293 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 BCL2L2Q92843 193 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-211ENST00000476772 BARHL1Q9BZE3 327 aa25.2■■□□□ 1.62
VEGFA-211ENST00000476772 MYL9P24844 172 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 HTR5AP47898 357 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 ECH1Q13011 328 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 PABPC1L2AQ5JQF8 200 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF704Q6ZNC4 412 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-211ENST00000476772 NAA40Q86UY6 237 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 ZGRF1Q86YA3 2104 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 SPTSSAQ969W0 71 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 SLC25A46Q96AG3 418 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 ORAI1Q96D31 301 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 DACH2Q96NX9 599 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 OPN3Q9H1Y3 402 aaPredicted RBP25.19■■□□□ 1.62
VEGFA-211ENST00000476772 SLC24A3Q9HC58 644 aa25.19■■□□□ 1.62
VEGFA-211ENST00000476772 LOC107986453A0A1B0GWG9 222 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 M0R135 149 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 P2RY10O00398 339 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 ARL6IP5O75915 188 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 ISG15P05161 165 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 ANXA2P07355 339 aaKnown RBP25.18■■□□□ 1.62
VEGFA-211ENST00000476772 UBCP0CG48 685 aaKnown RBP25.18■■□□□ 1.62
VEGFA-211ENST00000476772 CEACAM8P31997 349 aaPredicted RBP25.18■■□□□ 1.62
VEGFA-211ENST00000476772 SOX6P35712 828 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 RBPJQ06330 500 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 HNRNPA0Q13151 305 aaKnown RBP25.18■■□□□ 1.62
VEGFA-211ENST00000476772 HSD17B12Q53GQ0 312 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 SFRP5Q5T4F7 317 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 FAM57BQ71RH2 274 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 PRSS45Q7RTY3 260 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 OR8B12Q8NGG6 310 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 TSEN15Q8WW01 171 aaKnown RBP25.18■■□□□ 1.62
VEGFA-211ENST00000476772 PHYHIPQ92561 330 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF799Q96GE5 643 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 NOX3Q9HBY0 568 aa25.18■■□□□ 1.62
VEGFA-211ENST00000476772 INTS1Q8N201 2190 aaKnown RBP25.18■■□□□ 1.62
VEGFA-211ENST00000476772 CD79AP11912 226 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 ACHEP22303 614 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 SLC6A9P48067 706 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 CAV3P56539 151 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF610Q8N9Z0 462 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 MCFD2Q8NI22 146 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 TBC1D15Q8TC07 691 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 SH3BGRL2Q9UJC5 107 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 ERVH48-1M5A8F1 160 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 LYZL6O75951 148 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 ACSM4P0C7M7 580 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 MAPK3P27361 379 aaPredicted RBP25.17■■□□□ 1.62
VEGFA-211ENST00000476772 RORCP51449 518 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 TBRG1Q3YBR2 411 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF404Q494X3 552 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 TMEM244Q5VVB8 128 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 PCSK4Q6UW60 755 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 GABRG1Q8N1C3 465 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 SLC17A5Q9NRA2 495 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF319Q9P2F9 582 aa25.17■■□□□ 1.62
VEGFA-211ENST00000476772 RAD51DO75771 328 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 NCR1O76036 304 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 COX5AP20674 150 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 TGFBR3Q03167 851 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 KRTAP27-1Q3LI81 207 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 ZNF433Q8N7K0 673 aaPredicted RBP25.16■■□□□ 1.62
VEGFA-211ENST00000476772 CPEB3Q8NE35 698 aaKnown RBP25.16■■□□□ 1.62
VEGFA-211ENST00000476772 TMEM106AQ96A25 262 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 HHLA2Q9UM44 414 aa25.16■■□□□ 1.62
VEGFA-211ENST00000476772 TRBV5-7A0A0A0MS05 114 aa25.15■■□□□ 1.62
VEGFA-211ENST00000476772 APOC1P02654 83 aa25.15■■□□□ 1.62
VEGFA-211ENST00000476772 PGAM5Q96HS1 289 aa25.15■■□□□ 1.62
VEGFA-211ENST00000476772 NXF2Q9GZY0 626 aaKnown RBP25.15■■□□□ 1.62
VEGFA-211ENST00000476772 DHDHQ9UQ10 334 aa25.15■■□□□ 1.62
VEGFA-211ENST00000476772 TRAV1-2A0A0B4J238 106 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 CIB4A0PJX0 185 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 C5orf63A6NC05 138 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 E9PLN8 166 aa25.14■■□□□ 1.62
VEGFA-211ENST00000476772 UBL3O95164 117 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms