RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ETHE1O95571 254 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 IAPPP10997 89 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CPEP16870 476 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 TGFBR1P36897 503 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CTU2Q2VPK5 515 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 TMEM30AQ9NV96 361 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 K7EQM0 130 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 PCBP3P57721 371 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 DPTQ07507 201 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CA13Q8N1Q1 262 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 FBXL6Q8N531 539 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CPEB3Q8NE35 698 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 OR1M1Q8NGA1 313 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 OPALINQ96PE5 141 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 OR5G3P0C626 314 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 SRFP11831 508 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 SUB1P53999 127 aaKnown RBP eCLIP9.97□□□□□ -0.81
VAPB-204ENST00000475243 DOC2BQ14184 412 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 FAM74A1Q5RGS3 127 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 OR6K3Q8NGY3 331 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 OR4Q3Q8NH05 313 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 NDRG4Q9ULP0 352 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 SHISA8B8ZZ34 492 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CLDN15P56746 228 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CDC20BQ86Y33 519 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ARIH2OSQ8N7S6 290 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 FYTTD1Q96QD9 318 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 SLC25A37Q9NYZ2 338 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ACKR3P25106 362 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ETV6P41212 452 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 CCR9P51686 369 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 RPS16P62249 146 aaKnown RBP9.97□□□□□ -0.81
VAPB-204ENST00000475243 FOXC1Q12948 553 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 ANKRD33Q7Z3H0 272 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 EXD3Q8N9H8 876 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 PDFQ9HBH1 243 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 TMEM9BQ9NQ34 198 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 NDRG3Q9UGV2 375 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 B3GALT5Q9Y2C3 310 aa9.97□□□□□ -0.81
VAPB-204ENST00000475243 GPR37O15354 613 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 SELEP16581 610 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 ARR3P36575 388 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 TAF9Q16594 264 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 SYT6Q5T7P8 510 aaPredicted RBP9.96□□□□□ -0.81
VAPB-204ENST00000475243 TMEM43Q9BTV4 400 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 SARGQ9BW04 601 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 FN3KRPQ9HA64 309 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 MED9Q9NWA0 146 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 KLF13Q9Y2Y9 288 aaPredicted RBP9.96□□□□□ -0.81
VAPB-204ENST00000475243 XKR7Q5GH72 579 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 ZFP62Q8NB50 900 aaPredicted RBP9.96□□□□□ -0.81
VAPB-204ENST00000475243 SEH1LQ96EE3 360 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 DDOQ99489 341 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 NARFLQ9H6Q4 476 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 SLC22A13Q9Y226 551 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 H0YIG0 161 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 PDGFAP04085 211 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 DTYMKP23919 212 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 HAAOP46952 286 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 SKA3Q8IX90 412 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 PLPPR2Q96GM1 343 aa9.96□□□□□ -0.81
VAPB-204ENST00000475243 CABIN1Q9Y6J0 2220 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 SMAD4Q13485 552 aaKnown RBP9.96□□□□□ -0.82
VAPB-204ENST00000475243 HMGN3Q15651 99 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 PLXDC2Q6UX71 529 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 ORAI1Q96D31 301 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 SLC35E1Q96K37 410 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 FZR1Q9UM11 496 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 APC2O95996 2303 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 KLK10O43240 276 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 CRYAAP02489 173 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 B4GALT1P15291 398 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 DGCR2P98153 550 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 AGERQ15109 404 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 LHFPL2Q6ZUX7 228 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 PLRG1O43660 514 aaKnown RBP9.96□□□□□ -0.82
VAPB-204ENST00000475243 CHRM2P08172 466 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 INSM1Q01101 510 aaPredicted RBP9.96□□□□□ -0.82
VAPB-204ENST00000475243 EXOSC2Q13868 293 aaKnown RBP9.96□□□□□ -0.82
VAPB-204ENST00000475243 RTL8BQ17RB0 113 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 ZNF620Q6ZNG0 422 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 PKD1L3Q7Z443 1732 aa9.96□□□□□ -0.82
VAPB-204ENST00000475243 ACHEP22303 614 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 SOX18P35713 384 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 UBE2G1P62253 170 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 FCRL6Q6DN72 434 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 TNFRSF12AQ9NP84 129 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 POLDIP2Q9Y2S7 368 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 FAM96BQ9Y3D0 163 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 SEC14L6B5MCN3 397 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 ZNF195O14628 629 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 ZNF121P58317 390 aaPredicted RBP9.95□□□□□ -0.82
VAPB-204ENST00000475243 SLC51BQ86UW2 128 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 GLCCI1Q86VQ1 547 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 OR2AE1Q8NHA4 323 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 MARC2Q969Z3 335 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 LAT2Q9GZY6 243 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 C20orf202A1L168 122 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 UPK1AO00322 258 aa9.95□□□□□ -0.82
VAPB-204ENST00000475243 DCTN6O00399 190 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms