RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 RAP1BP61224 184 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 ERVS71-1P61550 626 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 LCN6P62502 163 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 RAP1AP62834 184 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 ZNF45Q02386 682 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 CD47Q08722 323 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 GPR50Q13585 617 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 ENDOGQ14249 297 aaKnown RBP6.16□□□□□ -1.42
LSAMP-203ENST00000474851 SGCAQ16586 387 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 TMEM249Q2WGJ8 235 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 ESCO2Q56NI9 601 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 PABPC1L2AQ5JQF8 200 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 UBE2UQ5VVX9 321 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 STEAP3Q658P3 488 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 GDPD3Q7L5L3 318 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 RRM2BQ7LG56 351 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 KCTD20Q7Z5Y7 419 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 THAP5Q7Z6K1 395 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 PRIMA1Q86XR5 153 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 LHFPL5Q8TAF8 219 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 NEU4Q8WWR8 484 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-203ENST00000474851 MAP6Q96JE9 813 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 POM121L2Q96KW2 1035 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 NSMCE2Q96MF7 247 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 SIGLEC11Q96RL6 698 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 VRK1Q99986 396 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-203ENST00000474851 SYT3Q9BQG1 590 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 ZNF416Q9BWM5 594 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 RAB1BQ9H0U4 201 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 WNT5BQ9H1J7 359 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 KCNN2Q9H2S1 579 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 MMP27Q9H306 513 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 RNF121Q9H920 327 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 POLE4Q9NR33 117 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 USE1Q9NZ43 259 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 VSX1Q9NZR4 365 aaPredicted RBP6.16□□□□□ -1.42
LSAMP-203ENST00000474851 EIF3KQ9UBQ5 218 aaKnown RBP6.16□□□□□ -1.42
LSAMP-203ENST00000474851 REV1Q9UBZ9 1251 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 IL20RAQ9UHF4 553 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 FZR1Q9UM11 496 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 TMEM5Q9Y2B1 443 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 SPEF1Q9Y4P9 236 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 TIMM10BQ9Y5J6 103 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 V9GYQ6 96 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 JMJD1CQ15652 2540 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 TLN2Q9Y4G6 2542 aa6.16□□□□□ -1.42
LSAMP-203ENST00000474851 NSD1Q96L73 2696 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 ABCA2Q9BZC7 2435 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 IGLV3-9A0A075B6K5 115 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 A0A0X1KG70 313 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 LOC390937A0A1W2PQ73 354 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 HMX3A6NHT5 357 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 UNC119BA6NIH7 251 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 METTL15A6NJ78 407 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 SNTNA6NMZ2 147 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 CENPXA8MT69 81 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 NDUFS8O00217 210 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 CTDSP2O14595 271 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 EI24O14681 340 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 SYNGR3O43761 229 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 CRLF1O75462 422 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 PTHP01270 115 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 KRT8P05787 483 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 CST2P09228 141 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 CSF3P09919 207 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 FAM157BP0CG42 384 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 NR2C1P13056 603 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 APEHP13798 732 aaKnown RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 DAOP14920 347 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 SPNP16150 400 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 USF1P22415 310 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 COL8A2P25067 703 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 STOMP27105 288 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 GIFP27352 417 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 SDHAP31040 664 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 RPL4P36578 427 aaKnown RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 CDKN2AP42771 156 aaKnown RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 MAGEA2P43356 314 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 PDLIM4P50479 330 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 NKX2-5P52952 324 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 SMIM11AP58511 58 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 PLP2Q04941 152 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 BAMBIQ13145 260 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 IL18R1Q13478 541 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 RIN1Q13671 783 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 MAD2L1BPQ15013 274 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 RFX4Q33E94 735 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 TMEM255AQ5JRV8 349 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 ELFN2Q5R3F8 820 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 C6orf141Q5SZD1 244 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 RSBN1Q5VWQ0 802 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 OTPQ5XKR4 325 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 GPR139Q6DWJ6 353 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 ZNF770Q6IQ21 691 aaPredicted RBP6.15□□□□□ -1.42
LSAMP-203ENST00000474851 C1orf94Q6P1W5 598 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 DPY19L2P2Q6ZN68 376 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 PTCHD4Q6ZW05 846 aa6.15□□□□□ -1.42
LSAMP-203ENST00000474851 ZNF767PQ75MW2 155 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms