RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 C3orf49Q96BT1 292 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 C2orf50Q96LR7 162 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 ZNF285Q96NJ3 590 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 OR2A5Q96R48 311 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 SULT4A1Q9BR01 284 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 RGCCQ9H4X1 137 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 LMAN1LQ9HAT1 526 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 SEBOXQ9HB31 216 aaPredicted RBP7.22□□□□□ -1.25
CCDC93-208ENST00000474546 MMP25Q9NPA2 562 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 CUTCQ9NTM9 273 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 LUZP4Q9P127 313 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 THAP10Q9P2Z0 257 aaPredicted RBP7.22□□□□□ -1.25
CCDC93-208ENST00000474546 HCSTQ9UBK5 93 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 CCL26Q9Y258 94 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 TMED3Q9Y3Q3 217 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 ADAM18Q9Y3Q7 739 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 TIMM10BQ9Y5J6 103 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 HEATR5BQ9P2D3 2071 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 MUC22E2RYF6 1773 aaPredicted RBP7.22□□□□□ -1.25
CCDC93-208ENST00000474546 LRRK1Q38SD2 2015 aa7.22□□□□□ -1.25
CCDC93-208ENST00000474546 TRAV36DV7A0A075B6V5 113 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 A0A1B0GVT2 93 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 RHPN2P1A8MT19 583 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 C4orf51C9J302 202 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CYR61O00622 381 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 IFNA21P01568 189 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CSTBP04080 98 aaKnown RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CD5P06127 495 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ITGA5P08648 1049 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 SEC11BP0C7V7 166 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 VAMP1P23763 118 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 S100A2P29034 98 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ATP1B3P54709 279 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 SEC13P55735 322 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 IGLV3-21P80748 117 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 OC90Q02509 493 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 PLA2G7Q13093 441 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 TRMT12Q53H54 448 aaKnown RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 KLHL26Q53HC5 615 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF776Q68DI1 518 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 FAAP20Q6NZ36 180 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF585AQ6P3V2 769 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 FIGNL1Q6PIW4 674 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 FIGLAQ6QHK4 219 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 DBX2Q6ZNG2 339 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ATG4DQ86TL0 474 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CATSPERDQ86XM0 798 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CACUL1Q86Y37 369 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 C10orf53Q8N6V4 93 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 LRRC75AQ8NAA5 344 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF248Q8NDW4 579 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 OR13D1Q8NGV5 346 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 OR8S1Q8NH09 359 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 LYPD6BQ8NI32 183 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 RXFP4Q8TDU9 374 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 RHBDD1Q8TEB9 315 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 EMG1Q92979 244 aaKnown RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 SLC25A28Q96A46 364 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CPNE2Q96FN4 548 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 SLC25A44Q96H78 314 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 Q96M85 177 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 VSTM2LQ96N03 204 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 SLC46A1Q96NT5 459 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 URM1Q9BTM9 101 aaKnown RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 GPR174Q9BXC1 333 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 TSPAN10Q9H1Z9 355 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 LINC00597Q9H2U6 94 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF768Q9H5H4 540 aaKnown RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 TAF9BQ9HBM6 251 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 C1orf123Q9NWV4 160 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 VSX1Q9NZR4 365 aaPredicted RBP7.21□□□□□ -1.26
CCDC93-208ENST00000474546 KCNE5Q9UJ90 142 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 KLK13Q9UKR3 277 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 ANAPC10Q9UM13 185 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 SLC5A6Q9Y289 635 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 OR10H1Q9Y4A9 318 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 CSAG2Q9Y5P2 127 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 WNT6Q9Y6F9 365 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 R4GMQ9 66 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 APC2O95996 2303 aa7.21□□□□□ -1.26
CCDC93-208ENST00000474546 TRAV8-7A0A075B6U6 113 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
CCDC93-208ENST00000474546 A0A0J9YY10 115 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 A0A1W2PQD3 144 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF860A6NHJ4 632 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 ZNF729A6NN14 1252 aaPredicted RBP7.2□□□□□ -1.26
CCDC93-208ENST00000474546 COLCA2A8K830 154 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 AP4M1O00189 453 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 SCAMP1O15126 338 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 PPM1DO15297 605 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 CCL16O15467 120 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 EIF3GO75821 320 aaKnown RBP eCLIP7.2□□□□□ -1.26
CCDC93-208ENST00000474546 SFT2D2O95562 160 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 TSPAN15O95858 294 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 NGFRP08138 427 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 SFTA3P0C7M3 94 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 LINC00271P0C7V0 271 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 NR2C1P13056 603 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 PRF1P14222 555 aa7.2□□□□□ -1.26
CCDC93-208ENST00000474546 PGAM2P15259 253 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms