RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 TPI1P60174 286 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SH3BP2P78314 561 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 PPM1JQ5JR12 505 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 AKR1C8PQ5T2L2 129 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 COX15Q7KZN9 410 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 DND1Q8IYX4 353 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 SVBPQ8N300 66 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 OR52E4Q8NGH9 312 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SHKBP1Q8TBC3 707 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 Q8WTZ3 238 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 C10orf82Q8WW14 230 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 C8orf44Q96CB5 159 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SLC35E1Q96K37 410 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SLC25A51Q9H1U9 297 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SLC25A32Q9H2D1 315 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 RHOJQ9H4E5 214 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 ZBTB26Q9HCK0 441 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 IL23AQ9NPF7 189 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 ACSS2Q9NR19 701 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 DUS2Q9NX74 493 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 ERG28Q9UKR5 140 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 MMP17Q9ULZ9 603 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 TCF19Q9Y242 345 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 CDK13Q14004 1512 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 A0A087X0K7 114 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 TINCRA0A1B0GVN0 87 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FAM159BA6NKW6 160 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FOXI3A8MTJ6 420 aaPredicted RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 B4DGG1 531 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 B5MCH6 92 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 M0QZQ0 153 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 TMPRSS2O15393 492 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 RBFOX2O43251 390 aaKnown RBP eCLIP3.09□□□□□ -1.92
UBR3-208ENST00000474426 PLXNC1O60486 1568 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SLC16A7O60669 478 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FARS2O95363 451 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 GLUD1P00367 558 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 CD2P06729 351 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 GZMBP10144 247 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 ACP2P11117 423 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FPR2P25090 351 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 GRPRP30550 384 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 GEMP55040 296 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 DEFA1P59665 94 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 DEFA3P59666 94 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 MRPS34P82930 218 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 HHEXQ03014 270 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 ITPK1Q13572 414 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 EIF2B1Q14232 305 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 CTF1Q16619 201 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 SYTL3Q4VX76 610 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FAM102AQ5T9C2 384 aaPredicted RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 TNS3Q68CZ2 1445 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 RTL6Q6ICC9 239 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 LAPTM4BQ86VI4 370 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 OSR2Q8N2R0 312 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 EID2Q8N6I1 236 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 PNPLA1Q8N8W4 532 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 INO80EQ8NBZ0 244 aaPredicted RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 TAAR8Q969N4 342 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 GNRHR2Q96P88 292 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 LINC00470Q9BZP3 86 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 VN1R1Q9GZP7 353 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 ARL6Q9H0F7 186 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 FAM234AQ9H0X4 552 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 RBFOX1Q9NWB1 397 aaKnown RBP3.09□□□□□ -1.92
UBR3-208ENST00000474426 SLC25A37Q9NYZ2 338 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 OPTCQ9UBM4 332 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 HSPB8Q9UJY1 196 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 OSGIN2Q9Y236 505 aa3.09□□□□□ -1.92
UBR3-208ENST00000474426 XIRP1Q702N8 1843 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 IGHV2OR16-5A0A0B4J2B6 119 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 EXOC1LA0A1B0GW35 172 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ZNF724A8MTY0 619 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 RNASET2O00584 256 aaKnown RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 SYT7O43581 403 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ENTPD6O75354 484 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 RAB36O95755 333 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SBK3P0C264 359 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ALOX5APP20292 161 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SLC2A5P22732 501 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ITGB7P26010 798 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SSTR4P31391 388 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 METAP2P50579 478 aaKnown RBP eCLIP3.08□□□□□ -1.92
UBR3-208ENST00000474426 VAMP7P51809 220 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ZXDBP98169 803 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 ACSM2AQ08AH3 577 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 CRHR2Q13324 411 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SPA17Q15506 151 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 C3AR1Q16581 482 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 PRSS8Q16651 343 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 TBC1D28Q2M2D7 210 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SNAI3Q3KNW1 292 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 LGALSLQ3ZCW2 172 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 ACSM2BQ68CK6 577 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 OR2W3Q7Z3T1 314 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 C1QL4Q86Z23 238 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 SLC30A8Q8IWU4 369 aa3.08□□□□□ -1.92
UBR3-208ENST00000474426 LILRA3Q8N6C8 439 aaPredicted RBP3.08□□□□□ -1.92
UBR3-208ENST00000474426 TSTD1Q8NFU3 115 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms