RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 NUDCD2Q8WVJ2 157 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TRIM43Q96BQ3 446 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 SEC22AQ96IW7 307 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 C2orf50Q96LR7 162 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SLC22A13Q9Y226 551 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SNRNP200O75643 2136 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 TMED7-TICAM2A0A0A6YYA0 188 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 C11orf98E9PRG8 122 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 DCTN6O00399 190 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 MFNGO00587 321 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TO15178 435 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 ALOX12BO75342 701 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 JTBO76095 146 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 IFNA21P01568 189 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 GAPDHP04406 335 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 AKR1C4P17516 323 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SERPINF1P36955 418 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PNLIPRP2P54317 469 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PDZK1IP1Q13113 114 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 NR0B2Q15466 257 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 STPG1Q5TH74 334 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 C1orf140Q5VVS0 124 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 Q7L0L9 218 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SLC29A4Q7RTT9 530 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 NAA40Q86UY6 237 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 LURAP1LQ8IV03 231 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PNLDC1Q8NA58 520 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 OR5H2Q8NGV7 314 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 TCEAL3Q969E4 200 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 MMABQ96EY8 250 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 ARL5BQ96KC2 179 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 MICU1Q9BPX6 476 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 PARP11Q9NR21 331 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 WSB2Q9NYS7 404 aaPredicted RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 CTSFQ9UBX1 484 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 SUSD2Q9UGT4 822 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 C14orf166Q9Y224 244 aaKnown RBP5.49□□□□□ -1.53
HERC4-209ENST00000473533 TMED7Q9Y3B3 224 aa5.49□□□□□ -1.53
HERC4-209ENST00000473533 A0A1B0GTH9 108 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 GPR31O00270 319 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SYT7O43581 403 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CA11O75493 328 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 OR3A2P47893 321 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 MNX1P50219 401 aaPredicted RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 SPOCK1Q08629 439 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 PLA2G7Q13093 441 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ELAVL1Q15717 326 aaKnown RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 CD226Q15762 336 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 PCK2Q16822 640 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 TMEM71Q6P5X7 295 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 LRRC69Q6ZNQ3 347 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SLC35D2Q76EJ3 337 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CD163Q86VB7 1156 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 TMEM151BQ8IW70 566 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 GATSQ8NAP1 163 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ZSCAN1Q8NBB4 408 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ACBD4Q8NC06 268 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ADAMTS17Q8TE56 1095 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SLC37A2Q8TED4 501 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ST8SIA1Q92185 356 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SLC25A36Q96CQ1 311 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ARSGQ96EG1 525 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SMIM8Q96KF7 97 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 OR5B2Q96R09 309 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 RNF122Q9H9V4 155 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 TMEM74BQ9NUR3 256 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ASH2LQ9UBL3 628 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CGGBP1Q9UFW8 167 aaPredicted RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 FBXO4Q9UKT5 387 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ANAPC10Q9UM13 185 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 DTX4Q9Y2E6 619 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 EMC9Q9Y3B6 208 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 FLVCR1Q9Y5Y0 555 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 MRPS18BQ9Y676 258 aaKnown RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 PTPRSQ13332 1948 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 BORCS7-ASMTA0A0B4J1R7 106 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 RHPN2P1A8MT19 583 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 RAB27BO00194 218 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CCSO14618 274 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SCAMP1O15126 338 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 NARSO43776 548 aaKnown RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 CST4P01036 141 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CSN2P05814 226 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 HRH1P35367 487 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 LSSP48449 732 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 RAB5CP51148 216 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CCR5P51681 352 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 DVL1P1P54792 670 aaPredicted RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 EMP2P54851 167 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SNRPNP63162 240 aaKnown RBP5.48□□□□□ -1.53
HERC4-209ENST00000473533 PLCXD2Q0VAA5 305 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 GPM6BQ13491 265 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 MELKQ14680 651 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 NNATQ16517 81 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 SGCAQ16586 387 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 TMEM196Q5HYL7 178 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 UNQ6126/PRO20091Q6UXV3 157 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 CARFQ8N187 725 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 ZNF561Q8N587 486 aa5.48□□□□□ -1.53
HERC4-209ENST00000473533 FAM160A2Q8N612 972 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms