RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 HOXB8P17481 243 aaPredicted RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 GGT1P19440 569 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CSNK2A2P19784 350 aaPredicted RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 RAB4AP20338 218 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CNR1P21554 472 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 F2RP25116 425 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 HRH1P35367 487 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MAS1LP35410 378 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 GPX4P36969 197 aaPredicted RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 RPS9P46781 194 aaKnown RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 RAB7AP51149 207 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CCNG1P51959 295 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 NCBP2P52298 156 aaKnown RBP eCLIP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ATP6V0D1P61421 351 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 RPS21P63220 83 aaKnown RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MXD1Q05195 221 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CDH17Q12864 832 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 SLAQ13239 276 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 FZD2Q14332 565 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 PRPSAP1Q14558 356 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 TSC22D1Q15714 1073 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ZSCAN26Q16670 478 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM83EQ2M2I3 478 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 RFX4Q33E94 735 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 PTPN20Q4JDL3 420 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CCNJQ5T5M9 372 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 C6orf183Q5T699 404 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 TPTE2P1Q5T6R2 138 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 LIN9Q5TKA1 542 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 UBE2UQ5VVX9 321 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ANKRD22Q5VYY1 191 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 SPECC1LQ69YQ0 1117 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ASCL4Q6XD76 172 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 LINC00173Q6ZV60 143 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MBOAT2Q6ZWT7 520 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 H2AFVQ71UI9 128 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 VKORC1L1Q8N0U8 176 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ARHGAP18Q8N392 663 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MREGQ8N565 214 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ARRDC1Q8N5I2 433 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ZFP41Q8N8Y5 198 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 GATSQ8NAP1 163 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 DRAXINQ8NBI3 349 aaPredicted RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 FBXO36Q8NEA4 188 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 OR51F2Q8NH61 342 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 OR6X1Q8NH79 312 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 OR51E1Q8TCB6 317 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ACER1Q8TDN7 264 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM230Q96A57 120 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 CIDECQ96AQ7 238 aaPredicted RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM131CQ96AQ9 280 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 DNAJC19Q96DA6 116 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 TMEM175Q9BSA9 504 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 NAA50Q9GZZ1 169 aaKnown RBP1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 DEFB129Q9H1M3 183 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 SLCO1B3Q9NPD5 702 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 FLVCR2Q9UPI3 526 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 ST3GAL6Q9Y274 331 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 KCNE3Q9Y6H6 103 aa1.34□□□□□ -2.19
GTF3C3-209ENST00000466862 MAPK8IP3Q9UPT6 1336 aa1.34□□□□□ -2.2
GTF3C3-209ENST00000466862 DHX57Q6P158 1386 aaKnown RBP1.34□□□□□ -2.2
GTF3C3-209ENST00000466862 BRWD3Q6RI45 1802 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 GSTTP1A0A1W2PQM5 241 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 A0A1W2PRF3 423 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 A0A1W2PRM7 423 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 A6NDN8 102 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC22A20A6NK97 555 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 NCBP2LA6PVI3 153 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 K7ERQ8 282 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 GABRPO00591 440 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 PEX7O00628 323 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 KMOO15229 486 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 YKT6O15498 198 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 RRP8O43159 456 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC19A2O60779 497 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 AQP8O94778 261 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TDP2O95551 362 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 NPPAP01160 153 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 OXTP01178 125 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 APOA1P02647 267 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SMIM10L1P0DMW3 83 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 OR5H8P0DN80 308 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TDGF1P13385 188 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 ZNF30P17039 623 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CELP19835 753 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CCNOP22674 350 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TDGF1P3P51864 188 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 CLDN6P56747 220 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 YWHAEP62258 255 aaKnown RBP1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC7A9P82251 487 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TCP10Q12799 353 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SMARCB1Q12824 385 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC39A6Q13433 755 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 RCAN2Q14206 197 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 GUCA2BQ16661 112 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TTLL9Q3SXZ7 439 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 LINC00483Q53H64 154 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 TPRG1LQ5T0D9 272 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 C12orf54Q6X4T0 127 aa1.33□□□□□ -2.2
GTF3C3-209ENST00000466862 SLC35D2Q76EJ3 337 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms