RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 THRSPQ92748 146 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 MARVELD1Q9BSK0 173 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 SF3B5Q9BWJ5 86 aaKnown RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 SLC6A15Q9H2J7 730 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 RYDENQ9NUL5 291 aaKnown RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 NUFIP1Q9UHK0 495 aaKnown RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 MRPS18CQ9Y3D5 142 aaKnown RBP11.3□□□□□ -0.6
VAPB-203ENST00000463370 RHBDD3Q9Y3P4 386 aa11.3□□□□□ -0.6
VAPB-203ENST00000463370 MED13Q9UHV7 2174 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 TMEM272A0A1B0GTI8 110 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 DNPH1O43598 174 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 TMEM127O75204 238 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 MT-ND4P03905 459 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 ITGB2P05107 769 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 CX3CR1P49238 355 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
VAPB-203ENST00000463370 GFOD2Q3B7J2 385 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 ABLIM2Q6H8Q1 611 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 BAIAP2L2Q6UXY1 529 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 FOXL2NBQ6ZUU3 175 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 GALNTL5Q7Z4T8 443 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 LYPD6Q86Y78 171 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 RAB40AQ8WXH6 277 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 ITPKCQ96DU7 683 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 FBXO17Q96EF6 278 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 ALKBH3Q96Q83 286 aaPredicted RBP11.29□□□□□ -0.6
VAPB-203ENST00000463370 GAL3ST1Q99999 423 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 MRI1Q9BV20 369 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 NPAP1Q9NZP6 1156 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 ALG5Q9Y673 324 aa11.29□□□□□ -0.6
VAPB-203ENST00000463370 CDRT15L2A8MXV6 281 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 CTAG2O75638 210 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 LHX2P50458 406 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 CCR6P51684 374 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 LSM6P62312 80 aaKnown RBP11.28□□□□□ -0.6
VAPB-203ENST00000463370 HYAL4Q2M3T9 481 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 OR10K2Q6IF99 312 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 LUZP2Q86TE4 346 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 GALNT16Q8N428 558 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 TMEM251Q8N6I4 163 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 BEX2Q9BXY8 128 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 CRLF2Q9HC73 371 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 TTLL8A6PVC2 850 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 HPNP05981 417 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 DBHP09172 617 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 CD37P11049 281 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 ABOP16442 354 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 GIFP27352 417 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 HTR2CP28335 458 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 GNALP38405 381 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 CCDC92Q53HC0 331 aaPredicted RBP11.28□□□□□ -0.6
VAPB-203ENST00000463370 DMRTC1Q5HYR2 192 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 ZNF813Q6ZN06 617 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 FAM57BQ71RH2 274 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 ABHD12BQ7Z5M8 362 aaPredicted RBP11.28□□□□□ -0.6
VAPB-203ENST00000463370 JAGN1Q8N5M9 183 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 OR52N4Q8NGI2 321 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 OR4D6Q8NGJ1 314 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 ST6GAL2Q96JF0 529 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 FER1L6-AS2Q96M78 137 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 ASCL3Q9NQ33 180 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 GPR84Q9NQS5 396 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
VAPB-203ENST00000463370 TRAV6A0A075B6T7 132 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 LOC100289279A0A1B0GTE1 492 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 CIB4A0PJX0 185 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 PRR33A8MZF0 331 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 NKX2-8O15522 239 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 GLSO94925 669 aaPredicted RBP11.27□□□□□ -0.6
VAPB-203ENST00000463370 WT1P19544 449 aaPredicted RBP11.27□□□□□ -0.6
VAPB-203ENST00000463370 CLDN18P56856 261 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 TBRG1Q3YBR2 411 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 ATAD3CQ5T2N8 411 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 GLT8D1Q68CQ7 371 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 ANKRD16Q6P6B7 361 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 RHOUQ7L0Q8 258 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 ZNF283Q8N7M2 679 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 MDS2Q8NDY4 140 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 CSAG2Q9Y5P2 127 aa11.27□□□□□ -0.6
VAPB-203ENST00000463370 PRRC2CQ9Y520 2896 aaKnown RBP11.27□□□□□ -0.61
VAPB-203ENST00000463370 F5H5K5 113 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 INMT-MINDY4F8WBC2 141 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 GABARAPH6UMI1 98 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 XRCC3O43542 346 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 GMDSO60547 372 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 IGHV3-9P01782 118 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 PATE4P0C8F1 98 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 NR2C1P13056 603 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 GUCA1AP43080 201 aaPredicted RBP11.27□□□□□ -0.61
VAPB-203ENST00000463370 C3AR1Q16581 482 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 FAAP20Q6NZ36 180 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 AAED1Q7RTV5 226 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 COMMD2Q86X83 199 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 OR13C9Q8NGT0 318 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 FAM71F1Q96KD3 344 aaPredicted RBP11.27□□□□□ -0.61
VAPB-203ENST00000463370 IP6K3Q96PC2 410 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 NUDT15Q9NV35 164 aa11.27□□□□□ -0.61
VAPB-203ENST00000463370 RBMX2Q9Y388 322 aaKnown RBP11.27□□□□□ -0.61
VAPB-203ENST00000463370 BOD1L1Q8NFC6 3051 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms